FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0522.ptfa, 646 aa vs ./tmplib.26680 library 1768371 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 15.1329+/-0.0112; mu= -32.7820+/- 0.742 mean_var=715.2336+/-172.555, 0's: 0 Z-trim: 14 B-trim: 2 in 1/35 Lambda= 0.0480 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1110 ( 911 res) mbg05269 ( 911) 1122 93 1.5e-19 mKIAA0763 ( 530 res) mbp04234 ( 530) 973 82 1.3e-16 mKIAA1471 ( 801 res) mtj02395 ( 801) 348 39 0.0018 mKIAA1064 ( 912 res) mpm10227 ( 912) 323 37 0.0067 >>mKIAA1110 ( 911 res) mbg05269 (911 aa) initn: 1261 init1: 1079 opt: 1122 Z-score: 443.2 bits: 92.8 E(): 1.5e-19 Smith-Waterman score: 1155; 43.255% identity (46.759% ungapped) in 467 aa overlap (2-467:462-894) 10 20 30 mKIAA0 LIRVQGEAQKVERLIEAFSQRYCVCNPALVR ::::::::::::::::::::::.::: .:. mKIAA1 FNRDVLDCVVDEMDFSNMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCMCNPEVVQ 440 450 460 470 480 490 40 50 60 70 80 90 mKIAA0 QFRNPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGIY ::.::::::::::::::::::::::..: .::: :.:::.::::::.: ::::.:.:::: mKIAA1 QFHNPDTIFILAFAIILLNTDMYSPNIKPDRKMMLEDFIRNLRGVDDGADIPRELVVGIY 500 510 520 530 540 550 100 110 120 130 140 150 mKIAA0 QRIQGRELRTNDDHVSQVQAVERMIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRLGLH .::: .::..:.:::. : ::. ::: : :::.:::::::: .:.:: : :. :. . : mKIAA1 ERIQQKELKSNEDHVTYVTKVEKSIVGMKTVLSMPHRRLVCCSRLFEVTDVNKLQKQAAH 560 570 580 590 600 610 160 170 180 190 200 210 mKIAA0 QREVFLFNDLLVVTKIFQKKKILVTYSFRQSFPLVEMHMQLFQNSYYQFGIKLLSAVPGG ::::::::::::. :. ::: ::.: .. :. :...::.: ::. :: : . . :. mKIAA1 QREVFLFNDLLVILKLCPKKKSSFTYTFCKAVGLLGMRFHLFENEYYSHGITLATPLSGS 620 630 640 650 660 670 220 230 240 250 260 270 mKIAA0 ERKVLIIFNAPSLQDRLRFTSDLRESIAEVQEMEKYRVESELEKQKGMMRPNASQPGGAK :.: .. : : . .. .:. ::.:::::: :.:. :.: :::::.: . . . .::. mKIAA1 EKKQVLHFCALGSDEMQKFVEDLKESIAEVTELEQIRIEWELEKQQGT-KTLSVRSAGAQ 680 690 700 710 720 730 280 290 300 310 320 330 mKIAA0 DSVNGTLARSSLEDTYGAGDGLKRGALSSSLRDLSDAGKRGRRNSVGSLDSTIEGSVISS . .. . . . ::. ..: ::. .. . . .... ... .:. . mKIAA1 GDPQSKQGSPTAKREAMAGE---KAAESSGEVSIHNRLQTSQHSPKLGVE---RGA--PA 740 750 760 770 780 340 350 360 370 380 390 mKIAA0 PRPHQRMPPPPPPPPPEEYKSQRPVSNSSSFLGSLFGSKRGKGPFQMPPP-PTGQASASS : : :: :: : : . : : :. .::: : : . mKIAA1 PSPPTSPPPLPPDPQPSPLREQPP-------------------PLPLPPPTPPGTLVQCQ 790 800 810 820 400 410 420 430 440 450 mKIAA0 SSASSTHHHHHHHHHGHSHGGLGVLPDGQSKLQALHAQYCQGPGPAPPPYLPPQQPPLPP . .. . . . . .. ..:. .. . .::: : .:::::: mKIAA1 QIVKVIVLDKPCLARMEPLLSQALSCYASSSSDSCGSTPLRGPGS---PVKVIHQPPLPP 830 840 850 860 870 880 460 470 480 490 500 510 mKIAA0 PPQQPPPLPQLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGRPGRAPRRGAGGHPQ :: :: . .. :: mKIAA1 PP---PPYNHPHQFCPPGSMLLRRRYSSGSRSLV 890 900 910 >>mKIAA0763 ( 530 res) mbp04234 (530 aa) initn: 988 init1: 724 opt: 973 Z-score: 390.6 bits: 82.2 E(): 1.3e-16 Smith-Waterman score: 1641; 71.955% identity (76.048% ungapped) in 353 aa overlap (2-343:182-526) 10 20 30 mKIAA0 LIRVQGEAQKVERLIEAFSQRYCVCNPALVR ::::::::::::::::::::::::::..:: mKIAA0 FNRDVLDCVVDEMDFSAMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCVCNPGVVR 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA0 QFRNPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRGVDNGEDIPRDLLVGIY :::::::::::::::::::::::::.:: ::::::.::.:::::::.::::::. :.::: mKIAA0 QFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPRETLIGIY 220 230 240 250 260 270 100 110 120 130 140 mKIAA0 QRIQGRELRTNDDHVSQVQAVERMIVGKKP----------VLSLPHRRLVCCCQLYEVPD .::. :::.::.::::::: ::..:::::: ::::::::::: :.:..::: mKIAA0 ERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFQVPD 280 290 300 310 320 330 150 160 170 180 190 200 mKIAA0 PNRPQRLGLHQREVFLFNDLLVVTKIFQKKKILVTYSFRQSFPLVEMHMQLFQNSYYQFG ::.::.:::::::.::::::::::::::::: ::::::::: : :.. ::.:.:: : mKIAA0 PNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNG 340 350 360 370 380 390 210 220 230 240 250 260 mKIAA0 IKLLSAVPGGERKVLIIFNAPSLQDRLRFTSDLRESIAEVQEMEKYRVESELEKQKGMMR :.: :::::.. :::: ::::. ::: .::.:::::.::::::::.:.:::::::::..: mKIAA0 IRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESVAEVQEMEKHRIESELEKQKGVVR 400 410 420 430 440 450 270 280 290 300 310 320 mKIAA0 PNASQPGG-AKDSVNGTLARSSLEDTYGAGDGLKRGALSSSLRDLSDAGKRGRRNSVGSL :. :: .. :.: ::::.:. :.:.:..:.::::.::::::::::.:::::::.:.::: mKIAA0 PSMSQCSSLKKESGNGTLSRACLDDSYASGEGLKRSALSSSLRDLSEAGKRGRRSSAGSL 460 470 480 490 500 510 330 340 350 360 370 380 mKIAA0 DSTIEGSVISSPRPHQRMPPPPPPPPPEEYKSQRPVSNSSSFLGSLFGSKRGKGPFQMPP .:..: .: : :: :: mKIAA0 ESNVEF------QPFQ--PPQPPVLCS 520 530 >>mKIAA1471 ( 801 res) mtj02395 (801 aa) initn: 339 init1: 132 opt: 348 Z-score: 154.5 bits: 39.2 E(): 0.0018 Smith-Waterman score: 379; 29.326% identity (33.557% ungapped) in 341 aa overlap (311-630:239-557) 290 300 310 320 330 340 mKIAA0 SSLEDTYGAGDGLKRGALSSSLRDLSDAGKRGRRNSVGSLDSTIEGSVISSPRPHQRMPP : ..: :... : . . : : .: mKIAA1 YAGVGPPQPVVGLPSAPPPQLSGPELAMTVRPATTTVDSVQAPISSHTAPRPNPTPALPQ 210 220 230 240 250 260 350 360 370 380 390 mKIAA0 P--P-PPPPPEEYKSQRPVSNSSSFLGSLFGSKRGKGPFQMPPPPTGQASASSSSASSTH : : : : :. . .:. .. .:.:. : .: : : : .... . mKIAA1 PCFPVPQPVPQSVPQPQPLPVPYTYS---IGTKQ---P--LPAPYT--YSIGTKQHLTGP 270 280 290 300 310 400 410 420 430 440 450 mKIAA0 HHHHHHHHGHSHGGLGVLPDGQSKLQALHAQYCQGPGPAPPPYLPPQQPPLPP----PPQ .:. : : .: .. :: .:: : : : : :: : : : mKIAA1 LPQHQFPPGIPTG----FPVPRTGPQA-QAQPQPQPQPQPQPQPQPQPQPQPQSQSQPQP 320 330 340 350 360 370 460 470 480 490 500 mKIAA0 QPPPLPQLGSIPPPPASAPPVGPHRHF---HAHG----PVPGPQHYTLGRPGRAPRRGAG :: : :: .. : :.. : : :. .: : : : : :.: .:: . mKIAA1 QPQPQPQRPAFGPQPTQQPLPFQHPHLFPSQAPGILPPPPPTPYHFT-PQPGVLGQPPPT 380 390 400 410 420 430 510 520 530 540 550 560 mKIAA0 GHPQFAPH-GRHPLHQPTSPLPLYSPAPQHP-PAHKQGPKHFIFSHHPQMMPAAGAAGGP : :. : .. :: .. ::. ::.: :: :. :: :: :.. . : mKIAA1 LHTQLYPGPSQDPLPPHSGALPFPSPGPPHPHPTLAYGPAPSPRPLGPQATPVSIRGPPP 440 450 460 470 480 490 570 580 590 600 610 mKIAA0 GSRPPGGSYSHPHHPQSPLSPHSPIP-PHPSYPPL--PPPSPH--TPHSPLPPTSPHGPL .:.: . :: :: .: :: : : :: :: ::: . . . : .::.. mKIAA1 ASQPTPS----PHLVPSP-AP-SPGPGPVPSRPPTAEPPPCLRRGAAAADLLSSSPESQH 500 510 520 530 540 620 630 640 mKIAA0 HASGPPGTANPPSANPKAKPSRISTVV .. ::: ..: mKIAA1 GGTQPPGGGQPLLQPTKVDAAEGRRPQALRLIEQDPYEHPERLQQLQQELEAFRGQLGDA 550 560 570 580 590 600 >>mKIAA1064 ( 912 res) mpm10227 (912 aa) initn: 217 init1: 127 opt: 323 Z-score: 144.5 bits: 37.5 E(): 0.0067 Smith-Waterman score: 326; 35.266% identity (41.011% ungapped) in 207 aa overlap (431-615:192-391) 410 420 430 440 450 mKIAA0 HHHHHGHSHGGLGVLPDGQSKLQALHAQYCQG--PGPAPPP---YLP-PQQPPLPPPPQQ :: : : ::: :: : .:: :: : . mKIAA1 EETRELLDKMLADDAEAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPPAPTS 170 180 190 200 210 220 460 470 480 490 500 mKIAA0 PPPLP-QLGSIPPPPASAPPVGPHRH-FHAHGPVPGPQHYTLGRPGRAPR------RGAG : : : : :::: :: :: . . .: :. : . : : .: mKIAA1 PNGRPMQGGPPPPPPPPPPPPGPPQMSLPTHEPLSPQQLQQDMYNKKIPSLFEIVVRPTG 230 240 250 260 270 280 510 520 530 540 550 560 mKIAA0 GHPQFAPH-G-RHPLHQPTSPLPLYSPAPQH-PPAHKQGPKHFIFSHHPQMMPAAGAAGG :.: . : : : : .: ..:.:. ::. :: : . ::.: : mKIAA1 ---QLAEKLGVRFP--GPGGPSGPMGPGPNMGPPGPMGGPMHP--DMHPDMHPDMHPDMH 290 300 310 320 330 570 580 590 600 610 mKIAA0 PGSRPPGGSYSHPH-HPQSPLSP-HSPIPPH-PSYPPLPPPSP-HTPHSPL-PPTSPHGP : .: :: ::. :..: .: :: :. ::. : .: .::: . :: : mKIAA1 PDMHPDMHPDMHPDMHPDMPMGPGMNPGPPMGPGGPPMMPYGPGDSPHSGMMPPIPPAQN 340 350 360 370 380 390 620 630 640 mKIAA0 LHASGPPGTANPPSANPKAKPSRISTVV mKIAA1 FYENFYPQQEGMEMEPGLVGDAGDTGNWYSSDEDEGGSSVTSILKTLRQQTSSRPQASVG 400 410 420 430 440 450 646 residues in 1 query sequences 1768371 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:22:14 2006 done: Mon Mar 27 10:22:15 2006 Scan time: 0.810 Display time: 0.090 Function used was FASTA [version 3.4t11 Apr 17, 2002]