# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbj00855.fasta.nr -Q ../query/mKIAA0612.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0612, 353 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918294 sequences Expectation_n fit: rho(ln(x))= 5.7680+/-0.000192; mu= 8.4719+/- 0.011 mean_var=94.8593+/-18.303, 0's: 24 Z-trim: 34 B-trim: 461 in 1/65 Lambda= 0.131684 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|33585767|gb|AAH55691.1| Bzrap1 protein [Mus mus ( 383) 1635 320.4 3.9e-85 gi|187466199|emb|CAQ52076.1| benzodiazapine recept (1786) 1634 320.7 1.4e-84 gi|56800287|emb|CAI35956.1| benzodiazapine recepto (1786) 1634 320.7 1.4e-84 gi|187466198|emb|CAQ52075.1| benzodiazapine recept (1846) 1634 320.7 1.5e-84 gi|41017649|sp|Q7TNF8.2|RIMB1_MOUSE RecName: Full= (1846) 1634 320.7 1.5e-84 gi|8925890|gb|AAF81660.1|AF199338_1 RIM binding pr (1734) 1551 304.9 7.8e-80 gi|8925888|gb|AAF81659.1|AF199337_1 RIM binding pr (1793) 1551 304.9 8e-80 gi|41017515|sp|Q9JIR0.2|RIMB1_RAT RecName: Full=Pe (1847) 1551 305.0 8.2e-80 gi|149053793|gb|EDM05610.1| benzodiazapine recepto (1845) 1550 304.8 9.3e-80 gi|109488716|ref|XP_213427.4| PREDICTED: similar t (1894) 1547 304.2 1.4e-79 gi|109114644|ref|XP_001103982.1| PREDICTED: periph (1879) 1350 266.8 2.6e-68 gi|171906567|ref|NP_077729.1| peripheral benzodiaz (1797) 1334 263.7 2.1e-67 gi|145559522|sp|O95153.2|RIMB1_HUMAN RecName: Full (1857) 1334 263.7 2.1e-67 gi|4104812|gb|AAD11957.1| peripheral benzodiazepin (1857) 1334 263.7 2.1e-67 gi|187955498|gb|AAI46853.1| Benzodiazapine recepto (1857) 1330 263.0 3.6e-67 gi|119614875|gb|EAW94469.1| benzodiazapine recepto (1797) 1324 261.8 7.7e-67 gi|152012816|gb|AAI50280.1| BZRAP1 protein [Homo s (1797) 1324 261.8 7.7e-67 gi|119614874|gb|EAW94468.1| benzodiazapine recepto (1857) 1324 261.8 7.9e-67 gi|73966687|ref|XP_548232.2| PREDICTED: similar to (1807) 1275 252.5 4.9e-64 gi|194675775|ref|XP_001790674.1| PREDICTED: benzod (1632) 1235 244.9 8.8e-62 gi|194217184|ref|XP_001917831.1| PREDICTED: simila (1908) 1208 239.8 3.5e-60 gi|133777077|gb|AAH66146.2| Benzodiazapine recepto ( 264) 1185 234.7 1.6e-59 gi|26342286|dbj|BAC34805.1| unnamed protein produc ( 264) 1183 234.4 2.1e-59 gi|52789430|gb|AAH83181.1| Bzrap1 protein [Mus mus ( 465) 1122 223.0 9.8e-56 gi|126307478|ref|XP_001366570.1| PREDICTED: simila (1885) 1017 203.5 2.9e-49 gi|148683885|gb|EDL15832.1| benzodiazapine recepto (1672) 983 197.0 2.3e-47 gi|149053792|gb|EDM05609.1| benzodiazapine recepto ( 983) 915 183.9 1.2e-43 gi|219521686|gb|AAI71787.1| BZRAP1 protein [Homo s (1848) 810 164.2 2e-37 gi|8925886|gb|AAF81658.1|AF199336_1 RIM binding pr ( 265) 511 106.7 5.6e-21 gi|149063196|gb|EDM13519.1| RIM binding protein 2, (1001) 512 107.4 1.4e-20 gi|109495812|ref|XP_001064396.1| PREDICTED: simila (1049) 512 107.4 1.4e-20 gi|41017516|sp|Q9JIR1.2|RIMB2_RAT RecName: Full=RI (1049) 512 107.4 1.4e-20 gi|109497120|ref|XP_001073349.1| PREDICTED: simila (1052) 512 107.4 1.4e-20 gi|109497118|ref|XP_001073406.1| PREDICTED: simila (1066) 512 107.4 1.4e-20 gi|149063197|gb|EDM13520.1| RIM binding protein 2, (1069) 512 107.4 1.4e-20 gi|56800288|emb|CAI35957.1| benzodiazapine recepto ( 250) 498 104.2 3e-20 gi|187466200|emb|CAQ52077.1| benzodiazapine recept ( 250) 498 104.2 3e-20 gi|114647818|ref|XP_522561.2| PREDICTED: RIM-bindi (1108) 505 106.1 3.7e-20 gi|41017589|sp|O15034.2|RIMB2_HUMAN RecName: Full= (1052) 504 105.9 4e-20 gi|119618918|gb|EAW98512.1| RIMS binding protein 2 (1052) 504 105.9 4e-20 gi|148687583|gb|EDL19530.1| mCG15781, isoform CRA_ (1004) 503 105.6 4.4e-20 gi|223462355|gb|AAI51101.1| Rimbp2 protein [Mus mu (1069) 503 105.7 4.6e-20 gi|148687582|gb|EDL19529.1| mCG15781, isoform CRA_ (1071) 503 105.7 4.7e-20 gi|41393528|sp|Q80U40.2|RIMB2_MOUSE RecName: Full= (1072) 503 105.7 4.7e-20 gi|157169794|gb|AAI52822.1| RIMS binding protein 2 (1079) 503 105.7 4.7e-20 gi|118100018|ref|XP_415717.2| PREDICTED: similar t (1869) 502 105.7 8.1e-20 gi|149571230|ref|XP_001516490.1| PREDICTED: simila ( 619) 481 101.3 5.6e-19 gi|41017764|sp|Q8QFX1.1|RIMB2_CHICK RecName: Full= (1325) 485 102.3 5.8e-19 gi|73994376|ref|XP_857096.1| PREDICTED: similar to (1074) 482 101.7 7.4e-19 gi|224075661|ref|XP_002188274.1| PREDICTED: benzod (1818) 485 102.4 7.4e-19 >>gi|33585767|gb|AAH55691.1| Bzrap1 protein [Mus musculu (383 aa) initn: 1629 init1: 1629 opt: 1635 Z-score: 1684.8 bits: 320.4 E(): 3.9e-85 Smith-Waterman score: 1635; 89.338% identity (93.015% similar) in 272 aa overlap (88-353:105-375) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::::::: gi|335 EEEEEEEELGSRPCSSQKQVAGNSIRENGAKATETGESRGQDNSGRRGPQRRGARVPRSG 80 90 100 110 120 130 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|335 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK 140 150 160 170 180 190 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|335 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS 200 210 220 230 240 250 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|335 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV 260 270 280 290 300 310 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : .: . : ::. gi|335 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPESGSLESGTSQAES 320 330 340 350 360 370 mKIAA0 WR : gi|335 QRTRRRRVQC 380 >>gi|187466199|emb|CAQ52076.1| benzodiazapine receptor a (1786 aa) initn: 1628 init1: 1628 opt: 1634 Z-score: 1674.6 bits: 320.7 E(): 1.4e-84 Smith-Waterman score: 1634; 89.338% identity (93.015% similar) in 272 aa overlap (88-353:1508-1778) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::::::: gi|187 NAYLRLPAWEKGEPERRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVPRSG 1480 1490 1500 1510 1520 1530 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK 1540 1550 1560 1570 1580 1590 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS 1600 1610 1620 1630 1640 1650 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV 1660 1670 1680 1690 1700 1710 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : .: . : ::. gi|187 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPESGSLESGTSQAES 1720 1730 1740 1750 1760 1770 mKIAA0 WR : gi|187 QRTRRRRVQC 1780 >>gi|56800287|emb|CAI35956.1| benzodiazapine receptor as (1786 aa) initn: 1628 init1: 1628 opt: 1634 Z-score: 1674.6 bits: 320.7 E(): 1.4e-84 Smith-Waterman score: 1634; 89.338% identity (93.015% similar) in 272 aa overlap (88-353:1508-1778) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::::::: gi|568 NAYLRLPAWEKGEPERRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVPRSG 1480 1490 1500 1510 1520 1530 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK 1540 1550 1560 1570 1580 1590 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS 1600 1610 1620 1630 1640 1650 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|568 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV 1660 1670 1680 1690 1700 1710 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : .: . : ::. gi|568 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPESGSLESGTSQAES 1720 1730 1740 1750 1760 1770 mKIAA0 WR : gi|568 QRTRRRRVQC 1780 >>gi|187466198|emb|CAQ52075.1| benzodiazapine receptor a (1846 aa) initn: 1628 init1: 1628 opt: 1634 Z-score: 1674.5 bits: 320.7 E(): 1.5e-84 Smith-Waterman score: 1634; 89.338% identity (93.015% similar) in 272 aa overlap (88-353:1568-1838) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::::::: gi|187 NAYLRLPAWEKGEPERRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVPRSG 1540 1550 1560 1570 1580 1590 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK 1600 1610 1620 1630 1640 1650 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS 1660 1670 1680 1690 1700 1710 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV 1720 1730 1740 1750 1760 1770 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : .: . : ::. gi|187 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPESGSLESGTSQAES 1780 1790 1800 1810 1820 1830 mKIAA0 WR : gi|187 QRTRRRRVQC 1840 >>gi|41017649|sp|Q7TNF8.2|RIMB1_MOUSE RecName: Full=Peri (1846 aa) initn: 1628 init1: 1628 opt: 1634 Z-score: 1674.5 bits: 320.7 E(): 1.5e-84 Smith-Waterman score: 1634; 89.338% identity (93.015% similar) in 272 aa overlap (88-353:1568-1838) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::::::: gi|410 NAYLRLPAWEKGEPERRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVPRSG 1540 1550 1560 1570 1580 1590 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK 1600 1610 1620 1630 1640 1650 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS 1660 1670 1680 1690 1700 1710 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV 1720 1730 1740 1750 1760 1770 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : .: . : ::. gi|410 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPESGSLESGTSQAES 1780 1790 1800 1810 1820 1830 mKIAA0 WR : gi|410 QRTRRRRVQC 1840 >>gi|8925890|gb|AAF81660.1|AF199338_1 RIM binding protei (1734 aa) initn: 1543 init1: 1543 opt: 1551 Z-score: 1589.6 bits: 304.9 E(): 7.8e-80 Smith-Waterman score: 1551; 84.191% identity (91.176% similar) in 272 aa overlap (88-353:1456-1726) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::: :.: gi|892 NTYLRLPAWEKGEPERRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVLRTG 1430 1440 1450 1460 1470 1480 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::: :::::.:::::::::::.:::::::::::::::.:::.::::::: gi|892 TTELAPPRSPQEAPSHQDLPLRVFVALFDYDPISMSPNPDAGEEELPFREGQILKVFGDK 1490 1500 1510 1520 1530 1540 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS ::::::::::::::::::::::::::::.:.:::::::::::::::::..:::::::: : gi|892 DADGFYRGESGGRTGYIPCNMVAEVAVDTPTGRQQLLQRGFLPPNVLTQGSGNGPSVYPS 1550 1560 1570 1580 1590 1600 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV ::::::::::::::::::: :.:::::::::::::: ::::::::::::::::::::::: gi|892 AHTPGPPPKPRRSKKVELEDPAQLCPGPPKLIHSAALKTSRPMVAAFDYNPRENSPNMDV 1610 1620 1630 1640 1650 1660 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : :: . : ::. gi|892 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPEAGGLDSGTSQAES 1670 1680 1690 1700 1710 1720 mKIAA0 WR : gi|892 QRTRRRRVQC 1730 >>gi|8925888|gb|AAF81659.1|AF199337_1 RIM binding protei (1793 aa) initn: 1543 init1: 1543 opt: 1551 Z-score: 1589.4 bits: 304.9 E(): 8e-80 Smith-Waterman score: 1551; 84.191% identity (91.176% similar) in 272 aa overlap (88-353:1515-1785) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::: :.: gi|892 NTYLRLPAWEKGEPERRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVLRTG 1490 1500 1510 1520 1530 1540 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::: :::::.:::::::::::.:::::::::::::::.:::.::::::: gi|892 TTELAPPRSPQEAPSHQDLPLRVFVALFDYDPISMSPNPDAGEEELPFREGQILKVFGDK 1550 1560 1570 1580 1590 1600 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS ::::::::::::::::::::::::::::.:.:::::::::::::::::..:::::::: : gi|892 DADGFYRGESGGRTGYIPCNMVAEVAVDTPTGRQQLLQRGFLPPNVLTQGSGNGPSVYPS 1610 1620 1630 1640 1650 1660 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV ::::::::::::::::::: :.:::::::::::::: ::::::::::::::::::::::: gi|892 AHTPGPPPKPRRSKKVELEDPAQLCPGPPKLIHSAALKTSRPMVAAFDYNPRENSPNMDV 1670 1680 1690 1700 1710 1720 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : :: . : ::. gi|892 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPEAGGLDSGTSQAES 1730 1740 1750 1760 1770 1780 mKIAA0 WR : gi|892 QRTRRRRVQC 1790 >>gi|41017515|sp|Q9JIR0.2|RIMB1_RAT RecName: Full=Periph (1847 aa) initn: 1543 init1: 1543 opt: 1551 Z-score: 1589.2 bits: 305.0 E(): 8.2e-80 Smith-Waterman score: 1551; 84.191% identity (91.176% similar) in 272 aa overlap (88-353:1569-1839) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::: :.: gi|410 NTYLRLPAWEKGEPERRGRSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVLRTG 1540 1550 1560 1570 1580 1590 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::: :::::.:::::::::::.:::::::::::::::.:::.::::::: gi|410 TTELAPPRSPQEAPSHQDLPLRVFVALFDYDPISMSPNPDAGEEELPFREGQILKVFGDK 1600 1610 1620 1630 1640 1650 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS ::::::::::::::::::::::::::::.:.:::::::::::::::::..:::::::: : gi|410 DADGFYRGESGGRTGYIPCNMVAEVAVDTPTGRQQLLQRGFLPPNVLTQGSGNGPSVYPS 1660 1670 1680 1690 1700 1710 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV ::::::::::::::::::: :.:::::::::::::: ::::::::::::::::::::::: gi|410 AHTPGPPPKPRRSKKVELEDPAQLCPGPPKLIHSAALKTSRPMVAAFDYNPRENSPNMDV 1720 1730 1740 1750 1760 1770 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : :: . : ::. gi|410 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPEAGGLDSGTSQAES 1780 1790 1800 1810 1820 1830 mKIAA0 WR : gi|410 QRTRRRRVQC 1840 >>gi|149053793|gb|EDM05610.1| benzodiazapine receptor as (1845 aa) initn: 1542 init1: 1542 opt: 1550 Z-score: 1588.2 bits: 304.8 E(): 9.3e-80 Smith-Waterman score: 1550; 84.191% identity (90.809% similar) in 272 aa overlap (88-353:1567-1837) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::: :.: gi|149 NTYLRLPAWEKGEPERRGHSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVLRTG 1540 1550 1560 1570 1580 1590 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::: :::::.:::::::::::.:::::::::::::::.:::.::::::: gi|149 TTELAPPRSPQEAPSHQDLPLRVFVALFDYDPISMSPNPDAGEEELPFREGQILKVFGDK 1600 1610 1620 1630 1640 1650 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS ::::::::::::::::::::::::::::.: :::::::::::::::::..:::::::: : gi|149 DADGFYRGESGGRTGYIPCNMVAEVAVDTPIGRQQLLQRGFLPPNVLTQGSGNGPSVYPS 1660 1670 1680 1690 1700 1710 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV ::::::::::::::::::: :.:::::::::::::: ::::::::::::::::::::::: gi|149 AHTPGPPPKPRRSKKVELEDPAQLCPGPPKLIHSAALKTSRPMVAAFDYNPRENSPNMDV 1720 1730 1740 1750 1760 1770 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCS------GSPAGHAYGQTFLAEG ::::::::::::::::::::::::: . . :..:.. : : :: . : ::. gi|149 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPEAGGLDSGTSQAES 1780 1790 1800 1810 1820 1830 mKIAA0 WR : gi|149 QRTRRRRVQC 1840 >>gi|109488716|ref|XP_213427.4| PREDICTED: similar to Pe (1894 aa) initn: 1542 init1: 1542 opt: 1547 Z-score: 1585.0 bits: 304.2 E(): 1.4e-79 Smith-Waterman score: 1547; 86.538% identity (94.231% similar) in 260 aa overlap (88-344:1567-1825) 60 70 80 90 100 110 mKIAA0 CLRCRRGQSRGVWATTEDSVSPLPSVALSLQATETGESRGQDNSGRRGPQRRGARVPRSG .::::::::::::::::::::::::: :.: gi|109 NTYLRLPAWEKGEPERRGHSAIGRTKEPPSRATETGESRGQDNSGRRGPQRRGARVLRTG 1540 1550 1560 1570 1580 1590 120 130 140 150 160 170 mKIAA0 TTELAPPRSPQEAPPHQDLPVRVFVALFDYDPVSMSPNPDAGEEELPFKEGQLLKVFGDK :::::::::::::: :::::.:::::::::::.:::::::::::::::.:::.::::::: gi|109 TTELAPPRSPQEAPSHQDLPLRVFVALFDYDPISMSPNPDAGEEELPFREGQILKVFGDK 1600 1610 1620 1630 1640 1650 180 190 200 210 220 230 mKIAA0 DADGFYRGESGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGFLPPNVLTEASGNGPSVYSS ::::::::::::::::::::::::::::.: :::::::::::::::::..:::::::: : gi|109 DADGFYRGESGGRTGYIPCNMVAEVAVDTPIGRQQLLQRGFLPPNVLTQGSGNGPSVYPS 1660 1670 1680 1690 1700 1710 240 250 260 270 280 290 mKIAA0 AHTPGPPPKPRRSKKVELEGPTQLCPGPPKLIHSAAQKTSRPMVAAFDYNPRENSPNMDV ::::::::::::::::::: :.:::::::::::::: ::::::::::::::::::::::: gi|109 AHTPGPPPKPRRSKKVELEDPAQLCPGPPKLIHSAALKTSRPMVAAFDYNPRENSPNMDV 1720 1730 1740 1750 1760 1770 300 310 320 330 340 350 mKIAA0 EAELPFRAGDVITVFGNMDDDGFYYVRSSWGKEGVLCSG---SPAGHAYGQTFLAEGWR ::::::::::::::::::::::::: . . :..:.. :. .:. .: : gi|109 EAELPFRAGDVITVFGNMDDDGFYYGELN-GQRGLVPSNFLEGPGPEAGGLDSGTSQAES 1780 1790 1800 1810 1820 1830 gi|109 QDSRVIIQGPPVPPGWHYALSSGSSSKTKLGESQGIAEKKQGLLAKGKELLKRLGSRKD 1840 1850 1860 1870 1880 1890 353 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 11:50:21 2009 done: Sun Mar 15 11:56:30 2009 Total Scan time: 843.190 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]