FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1716.ptfa, 277 aa vs ./tmplib.26680 library 1768740 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.2812+/-0.00488; mu= 6.1022+/- 0.327 mean_var=119.7596+/-28.588, 0's: 0 Z-trim: 22 B-trim: 0 in 0/36 Lambda= 0.1172 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0041 ( 807 res) mbg03660 ( 807) 696 128 1.3e-30 mKIAA0050 ( 158 res) mnj11353 ( 158) 525 99 2e-22 mKIAA1334 ( 992 res) mpm09174 ( 992) 208 46 1e-05 mFLJ00392 ( 445 res) mid31005 ( 445) 192 43 3.7e-05 mKIAA1148 ( 1589 res) mfj27189 (1589) 179 41 0.00044 mKIAA0172 ( 934 res) mbh02656 ( 934) 174 40 0.00053 mKIAA1139 ( 1224 res) mpg00286 (1224) 175 40 0.00058 mKIAA1728 ( 1313 res) mbg03474 (1313) 171 40 0.00097 mKIAA1223 ( 600 res) mfj51380 ( 600) 155 37 0.0036 mKIAA1146 ( 342 res) mbg10449 ( 342) 148 35 0.0054 mFLJ00246 ( 1454 res) mpm02140 (1454) 157 37 0.0054 mKIAA1306 ( 1347 res) mbg04314 (1347) 155 37 0.0065 >>mKIAA0041 ( 807 res) mbg03660 (807 aa) initn: 689 init1: 689 opt: 696 Z-score: 642.0 bits: 128.1 E(): 1.3e-30 Smith-Waterman score: 708; 51.383% identity (58.036% ungapped) in 253 aa overlap (8-250:542-775) 10 20 30 mKIAA1 THALSLAAATMERKF--RRDSLFCPDELDSLF---SY : .:::: . ..:. :.: .. . : mKIAA0 INRVYEAKLEKMGVKKPQPGQRQEKEAYIRAKYVERKFVDKYSALLSPSEQEKRIISKSC 520 530 540 550 560 570 40 50 60 70 80 mKIAA1 FD-----AGAAGAGPRSLSSDSGLGGSSDGSSDVLAFGTGSVVDSVTEEEGAESEESSSE : : :. : . :.:::. :. . . : ... .:. : :: : .::: mKIAA0 EDQRLSHARASVHTPVK-SNDSGIQQCSEDGRESLPSTVSA--NSLYEPEG-ERQESSVF 580 590 600 610 620 90 100 110 120 130 140 mKIAA1 VDGEAEAWSLADVRELHPGLLHPGLLAHQAARTRDLPALAAALAHGAEVNWADAADEGKT .:.. : :.::: ..:. ..:: .: ::::::.::::.. .. : mKIAA0 LDSK------------H---LNPGLQLYRASYEKNLPKMAEALAHGADVNWANSDENQAT 630 640 650 660 670 150 160 170 180 190 200 mKIAA1 PLVQAVLGGSLIVCEFLLQNGADVNQRDSLGRAPLHHATLLGRTGQVCLFLKRGADQHAL ::.::::::::..:::::::::.::::: ::.::::::.::.::::::::::::.::: mKIAA0 PLIQAVLGGSLVTCEFLLQNGANVNQRDVQGRGPLHHATVLGHTGQVCLFLKRGANQHAT 680 690 700 710 720 730 210 220 230 240 250 260 mKIAA1 DQEQQDPLTIAVQAANADIVTLLRLARMAEEMREAEAPPGQPGPLPGSSPTELQYRRCIQ :.: .:::.:::.::::::::::::::: :::::.:. :::: mKIAA0 DEEGKDPLSIAVEAANADIVTLLRLARMNEEMRESEGLYGQPGDETYQDIFRDFSQMASN 740 750 760 770 780 790 270 mKIAA1 EFIGLHLEES mKIAA0 NPEKLNRFQQDSQKF 800 >>mKIAA0050 ( 158 res) mnj11353 (158 aa) initn: 625 init1: 498 opt: 525 Z-score: 495.1 bits: 98.6 E(): 2e-22 Smith-Waterman score: 525; 64.062% identity (66.129% ungapped) in 128 aa overlap (123-250:3-126) 100 110 120 130 140 150 mKIAA1 EAWSLADVRELHPGLLHPGLLAHQAARTRDLPALAAALAHGAEVNWADAADEGKTPLVQA ::..: ::::::.:::..... . :::..: mKIAA0 PHLPTMADALAHGADVNWVNVGQGNATPLIRA 10 20 30 160 170 180 190 200 210 mKIAA1 VLGGSLIVCEFLLQNGADVNQRDSLGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQQ . ..::..:::::::::.::: :: ::.::::::.::.:: .::::::::: : : : . mKIAA0 TAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDTEGR 40 50 60 70 80 90 220 230 240 250 260 270 mKIAA1 DPLTIAVQAANADIVTLLRLARMAEEMREAEAPPGQPGPLPGSSPTELQYRRCIQEFIGL ::::::....:::::::::::.: ::::: :: : mKIAA0 DPLTIAMETTNADIVTLLRLAKM----REAEAAQGQAGDETYLDIFRDFSLMASDDPEKL 100 110 120 130 140 mKIAA1 HLEES mKIAA0 SRRSHDLHTL 150 >>mKIAA1334 ( 992 res) mpm09174 (992 aa) initn: 205 init1: 183 opt: 208 Z-score: 194.9 bits: 45.7 E(): 1e-05 Smith-Waterman score: 208; 27.404% identity (28.500% ungapped) in 208 aa overlap (36-238:53-257) 10 20 30 40 50 60 mKIAA1 LAAATMERKFRRDSLFCPDELDSLFSYFDAGAAGAGPRSLSSDSGLG---GSSDGSSDVL : ::. . .:.. . ... : . : mKIAA1 KSDTNEWNKNDDRLLQAVENGDAEKVASLLGKKGASATKHDSEGKTAFHLAAAKGHVECL 30 40 50 60 70 80 70 80 90 100 110 120 mKIAA1 AFGTGSVVDSVTEEEGAESEESSSEVDGEAEAW-SLADVRELHPGLLHPGLLA-HQAART . :: .... ...: . .:. : .: . . .. . : : : :: mKIAA1 KVMVTHGVDVTAQDSSGHSALHVAAKNGHPECIRKLLQYKSPAENIDNSGKTALHYAAAQ 90 100 110 120 130 140 130 140 150 160 170 180 mKIAA1 RDLPALAAALAHGAEVNWADAADEGKTPLVQAVLGGSLIVCEFLLQNGADVNQRDSLGRA : :. : . .: : .:. ::. :: .: .:.:::..:::::.::. ::. mKIAA1 GCLQAVQLLCEHKSPINLKDL--DGNIPLLVAVQNGHSEACHFLLDHGADVNSRDKNGRT 150 160 170 180 190 200 190 200 210 220 230 240 mKIAA1 PLHHATLLGRTGQVCLFLKRGADQHALDQEQQDPLTIAVQAANADIVTLLRLARMAEEMR : : : .. : ..:.::: .:. .. : . . :: : .:: :...... mKIAA1 ALMLACETGSSNTVDALIKKGADLSLVDSLGHNALHYSKLSENAGIQNLL-LSKISQDAD 210 220 230 240 250 250 260 270 mKIAA1 EAEAPPGQPGPLPGSSPTELQYRRCIQEFIGLHLEES mKIAA1 LKTPTKPKQHDQVSKISSERSGTPKKRKAPPPPISPTQLSDVSSPRSITSTPLSGKESVF 260 270 280 290 300 310 >>mFLJ00392 ( 445 res) mid31005 (445 aa) initn: 145 init1: 118 opt: 192 Z-score: 184.9 bits: 42.7 E(): 3.7e-05 Smith-Waterman score: 192; 31.973% identity (32.414% ungapped) in 147 aa overlap (79-225:77-221) 50 60 70 80 90 100 mKIAA1 SGLGGSSDGSSDVLAFGTGSVVDSVTEEEGAESEESSSEVDGEAEAWSLADVRELHPGLL ::.: :.. :: .: .: . :. mFLJ00 EMPMVGRMSTQERLKHAQKRRAQQVKMWAQAEKEAHSKKGHGERPWKEVAGLRPRKHVLF 50 60 70 80 90 100 110 120 130 140 150 160 mKIAA1 HPGLLAHQAARTRDLPALAAALAHGAEVNWADAADEGKTPLVQAVLGGSLIVCEFLLQNG :.. .:: :: . :. :. : :. ..: : : : . . . ::. : mFLJ00 PPSVALLEAAARNDLEEVRQFLTSGVSPNLAN--EDGLTALHQCCIDDFQEMAQQLLDAG 110 120 130 140 150 160 170 180 190 200 210 220 mKIAA1 ADVNQRDSLGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQQDPLTIAVQAANADIVT :::: ::: .::: :. :. : :...:::: :.... . : . .: . : mFLJ00 ADVNARDSECWTPLHAAATCGHLHLVELLISRGADLLAVNSDGNMPYDLCEDAQTLDCLE 170 180 190 200 210 220 230 240 250 260 270 mKIAA1 LLRLARMAEEMREAEAPPGQPGPLPGSSPTELQYRRCIQEFIGLHLEES mFLJ00 TAMANQGRAKLLELKHKQDALLRAQGRQRSLLRRRTSSAGSRGKVVRRVSLTHRTNLYRK 230 240 250 260 270 280 >>mKIAA1148 ( 1589 res) mfj27189 (1589 aa) initn: 167 init1: 142 opt: 179 Z-score: 165.7 bits: 41.0 E(): 0.00044 Smith-Waterman score: 179; 35.644% identity (36.364% ungapped) in 101 aa overlap (130-230:672-770) 100 110 120 130 140 150 mKIAA1 VRELHPGLLHPGLLAHQAARTRDLPALAAALAHGAEVNWADAADEGKTPLVQAVLGGSLI :.:::.:: :: .:.:::..:. : : mKIAA1 GAAVAQPNRRGAVPLFSTVRQGHWQIVDLLLTHGADVNMADK--QGRTPLMMAASEGHLG 650 660 670 680 690 160 170 180 190 200 210 mKIAA1 VCEFLLQNGADVNQRDSLGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQQDPLTIAV . .::: .::.. :. : . : : : :. . : .. :: :.. . :: .:. mKIAA1 TVDFLLAQGASIALMDKEGLTALSWACLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAA 700 710 720 730 740 750 220 230 240 250 260 270 mKIAA1 QAANADIVTLLRLARMAEEMREAEAPPGQPGPLPGSSPTELQYRRCIQEFIGLHLEES ..:..: .: mKIAA1 FYGDAEVVQFLVDHGAMIEHVDYSGMRPLDRAVGCRNTSVVVTLLKKGAKIGCQTLPSRP 760 770 780 790 800 810 >>mKIAA0172 ( 934 res) mbh02656 (934 aa) initn: 210 init1: 91 opt: 174 Z-score: 164.2 bits: 39.9 E(): 0.00053 Smith-Waterman score: 174; 32.667% identity (35.252% ungapped) in 150 aa overlap (110-251:781-927) 80 90 100 110 120 130 mKIAA1 ESEESSSEVDGEAEAWSLADVRELHPGLLHPGLLAHQAA--RTRDLPALAAALAHGAEVN : .:: :: .:. .. .. : .:: mKIAA0 SVSHSNFQIVKLLLDADVCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCG-DVN 760 770 780 790 800 140 150 160 170 180 190 mKIAA1 WADAADEGKTPLVQAVLGGSLIVCEFLLQNGADVNQRDSLGRAPLHHATLLGRTGQVCLF : :.. :.: :. :: : . . . :: ::::: .:. : . : :. :.. : :. mKIAA0 -AKASQAGQTALMLAVSHGRIDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLL 810 820 830 840 850 860 200 210 220 230 240 250 mKIAA1 LKR-GADQHALDQEQQDPLTIAVQAANADIVTLLRLARMAEEMREAEAPP--GQ---PGP : . : . : :.. . :.::..:.. ::..:: :.. .. . : :. ::: mKIAA0 LAQPGCNGHLEDNDGSTALSIALEAGHKDIAVLLY-AHLNFSKAQSPSTPRLGRKTSPGP 870 880 890 900 910 920 260 270 mKIAA1 LPGSSPTELQYRRCIQEFIGLHLEES mKIAA0 THRGSFD 930 >>mKIAA1139 ( 1224 res) mpg00286 (1224 aa) initn: 213 init1: 150 opt: 175 Z-score: 163.5 bits: 40.2 E(): 0.00058 Smith-Waterman score: 175; 36.842% identity (37.634% ungapped) in 95 aa overlap (136-230:65-157) 110 120 130 140 150 160 mKIAA1 GLLHPGLLAHQAARTRDLPALAAALAHGAEVNWADAADEGKTPLVQAVLGGSLIVCEFLL .:. :: .: . : .:.::::: . .:: mKIAA1 KNGDVTCVQKLVAKVKAAKTKLLGSTKRLNINYQDA--DGFSALHHAALGGSLELIALLL 40 50 60 70 80 90 170 180 190 200 210 220 mKIAA1 QNGADVNQRDSLGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQQDPLTIAVQAANAD . : :. .:: : :::.:. :: : :.:. .: .: . . : :: .:.: .. . mKIAA1 EAQATVDIKDSNGMRPLHYAAWQGRLEPVRLLLRASAAVNAASLDGQIPLHLAAQYGHYE 100 110 120 130 140 150 230 240 250 260 270 mKIAA1 IVTLLRLARMAEEMREAEAPPGQPGPLPGSSPTELQYRRCIQEFIGLHLEES . .: mKIAA1 VSEMLLQHQSNPCLVNKLKKTPLDLACEFGRLKVAQLLLNSHLCVALLEGEAKDPCDPNY 160 170 180 190 200 210 >>mKIAA1728 ( 1313 res) mbg03474 (1313 aa) initn: 275 init1: 138 opt: 171 Z-score: 159.5 bits: 39.6 E(): 0.00097 Smith-Waterman score: 175; 30.851% identity (36.025% ungapped) in 188 aa overlap (63-230:504-684) 40 50 60 70 80 90 mKIAA1 FDAGAAGAGPRSLSSDSGLGGSSDGSSDVLAFGTGSVVDSVTEEEGAESEESSSEVDGEA ..: .:::.:. . .:: ::.: mKIAA1 LLNCEWSAGPPQPGTLRKSQALQQALTAAASMGHSSVVQSLL----GMAEEHEIEVNGTD 480 490 500 510 520 100 110 120 130 mKIAA1 EAW-----SLADVR---ELHPGLLHPGLLAHQAARTRDLPAL--AAALAH---------- : . : : :. ::. : . .: : : .: : :: .: mKIAA1 TLWGETALTAAAGRGKVEICELLLERGAAVSRANR-RGVPPLFCAARQGHWQVVRLLLDR 530 540 550 560 570 580 140 150 160 170 180 190 mKIAA1 GAEVNWADAADEGKTPLVQAVLGGSLIVCEFLLQNGADVNQRDSLGRAPLHHATLLGRTG : .:: .: .:.:::. : : : . ::::..:: ... :. : . : : : :. . mKIAA1 GCDVNLSDK--QGRTPLMVASCEGHLSTVEFLLSKGAALSSLDKEGLSALSWACLKGHRA 590 600 610 620 630 640 200 210 220 230 240 250 mKIAA1 QVCLFLKRGADQHALDQEQQDPLTIAVQAANADIVTLLRLARMAEEMREAEAPPGQPGPL : ....::. :.. . :: .:. ..:. : : mKIAA1 VVQYLVEEGAEIDQTDKNGRTPLDLAAFYGDAETVLYLVEKGAVIEHVDHSGMRPLDRAI 650 660 670 680 690 700 260 270 mKIAA1 PGSSPTELQYRRCIQEFIGLHLEES mKIAA1 GCRNTAVVVTLLRKGAKLGNAAWAMATSKPDILIILLQKLVEEGNVMYKKGKMKEAAQRY 710 720 730 740 750 760 >>mKIAA1223 ( 600 res) mfj51380 (600 aa) initn: 148 init1: 148 opt: 155 Z-score: 149.3 bits: 36.6 E(): 0.0036 Smith-Waterman score: 182; 33.636% identity (34.906% ungapped) in 110 aa overlap (121-230:99-204) 100 110 120 130 140 150 mKIAA1 EAEAWSLADVRELHPGLLHPGLLAHQAARTRDLPALAAALAHGAEVNWADAADEGKTPLV ::. : ..:::.::. :: .:. : mKIAA1 VQILLENKSNIDQRGYDGRNALRVAALEGHRDIVELL--FSHGADVNYKDA--DGRPTLY 70 80 90 100 110 120 160 170 180 190 200 210 mKIAA1 QAVLGGSLIVCEFLLQNGADVNQRDSLGRAPLHHATLLGRTGQVCLFLKRGADQHALDQE .: ..: . :..:.:::.:. :. ::. :: . :.. .: ... :: .: :.: mKIAA1 ILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHVEMVRVLIACHADVNAADNE 130 140 150 160 170 180 220 230 240 250 260 270 mKIAA1 QQDPLTIAVQAANADIVTLLRLARMAEEMREAEAPPGQPGPLPGSSPTELQYRRCIQEFI ... : :. ... .: :: mKIAA1 KRSALQSAAWQGHVKVVQLLIEHGAVVDHTCNQGATALCIAAQEGHVDVVQVLLEHGADP 190 200 210 220 230 240 >>mKIAA1146 ( 342 res) mbg10449 (342 aa) initn: 121 init1: 121 opt: 148 Z-score: 146.2 bits: 35.2 E(): 0.0054 Smith-Waterman score: 148; 34.483% identity (36.585% ungapped) in 87 aa overlap (133-216:108-192) 110 120 130 140 150 160 mKIAA1 LHPGLLHPGLLAHQAARTRDLPALAAALAHGAEVNWADAADEGKTPLVQAVLGGSLIVCE ::::. .:. .:.: : ::..: : : mKIAA1 VWCCGWLPCTPLRIAATAGHGNCVDFLIRKGAEVDLVDV--KGQTALYVAVVNGHLESTE 80 90 100 110 120 130 170 180 190 200 210 mKIAA1 FLLQNGADVNQRDSLGRAPLHHATLLGRTGQVCLFLKRGAD---QHALDQEQQDPLTIAV .::. ::: : .:..::. .:: . ... ::: .: : . . :.. mKIAA1 ILLEAGADPNGSRHHRSTPVYHASRVGRDDILKALIRYGADVDVNHHLTPDTRPPFSRRL 140 150 160 170 180 190 220 230 240 250 260 270 mKIAA1 QAANADIVTLLRLARMAEEMREAEAPPGQPGPLPGSSPTELQYRRCIQEFIGLHLEES mKIAA1 TSLVVCPLYISAAYHNLQCFRLLLQAGANPDFNCNGPVNTQEFYRGSPGCVMDAVLRHGC 200 210 220 230 240 250 277 residues in 1 query sequences 1768740 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:51:31 2006 done: Mon Mar 27 10:51:32 2006 Scan time: 0.500 Display time: 0.090 Function used was FASTA [version 3.4t11 Apr 17, 2002]