# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbj00238.fasta.nr -Q ../query/mKIAA0078.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0078, 426 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7914080 sequences Expectation_n fit: rho(ln(x))= 6.6612+/-0.000202; mu= 4.6061+/- 0.011 mean_var=126.5720+/-24.013, 0's: 38 Z-trim: 55 B-trim: 48 in 1/65 Lambda= 0.114000 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|25091102|sp|Q61550.2|RAD21_MOUSE RecName: Full= ( 635) 2868 482.7 1e-133 gi|120537484|gb|AAI29917.1| RAD21 homolog (S. pomb ( 635) 2864 482.1 1.6e-133 gi|74228385|dbj|BAE24036.1| unnamed protein produc ( 601) 2860 481.4 2.4e-133 gi|74208640|dbj|BAE37576.1| unnamed protein produc ( 635) 2860 481.4 2.6e-133 gi|74219960|dbj|BAE40560.1| unnamed protein produc ( 635) 2860 481.4 2.6e-133 gi|12836153|dbj|BAB23527.1| unnamed protein produc ( 635) 2860 481.4 2.6e-133 gi|1304155|dbj|BAA08408.1| pokeweed agglutinin-bin ( 634) 2850 479.8 8e-133 gi|68533861|gb|AAH99200.1| RAD21 homolog (S. pombe ( 635) 2823 475.3 1.7e-131 gi|119612370|gb|EAW91964.1| RAD21 homolog (S. pomb ( 581) 2748 463.0 8.4e-128 gi|25091097|sp|O60216.2|RAD21_HUMAN RecName: Full= ( 631) 2748 463.0 8.9e-128 gi|1620398|emb|CAA66940.1| HR21spA [Homo sapiens] ( 631) 2748 463.0 8.9e-128 gi|109087299|ref|XP_001094435.1| PREDICTED: RAD21 ( 631) 2747 462.8 1e-127 gi|149721748|ref|XP_001496357.1| PREDICTED: simila ( 631) 2741 461.9 2e-127 gi|194035658|ref|XP_001928476.1| PREDICTED: simila ( 631) 2739 461.5 2.5e-127 gi|73974373|ref|XP_539142.2| PREDICTED: similar to ( 631) 2734 460.7 4.4e-127 gi|196475677|gb|ACG76389.1| RAD21 homolog (predict ( 631) 2727 459.6 9.8e-127 gi|110287797|sp|Q3SWX9.1|RAD21_BOVIN RecName: Full ( 630) 2718 458.1 2.7e-126 gi|149410580|ref|XP_001508586.1| PREDICTED: hypoth ( 708) 2667 449.7 1e-123 gi|73974377|ref|XP_850253.1| PREDICTED: similar to ( 643) 2665 449.4 1.2e-123 gi|126322245|ref|XP_001370002.1| PREDICTED: hypoth ( 634) 2657 448.0 2.9e-123 gi|53129492|emb|CAG31390.1| hypothetical protein [ ( 633) 2612 440.6 4.8e-121 gi|224046648|ref|XP_002200442.1| PREDICTED: RAD21 ( 631) 2602 439.0 1.5e-120 gi|50415190|gb|AAH77991.1| LOC503676 protein [Xeno ( 629) 2306 390.3 6.8e-106 gi|29336593|sp|O93310.1|RAD21_XENLA RecName: Full= ( 629) 2298 389.0 1.7e-105 gi|55730660|emb|CAH92051.1| hypothetical protein [ ( 527) 2074 352.1 1.8e-94 gi|94734241|emb|CAK04746.1| novel protein similar ( 637) 2015 342.5 1.8e-91 gi|114621401|ref|XP_001138624.1| PREDICTED: RAD21 ( 622) 1897 323.0 1.2e-85 gi|41349742|dbj|BAD08302.1| cohesin subunit Rad21 ( 636) 1868 318.3 3.3e-84 gi|37682179|gb|AAQ98016.1| RAD21 homolog [Danio re ( 643) 1834 312.7 1.6e-82 gi|28278834|gb|AAH45311.1| RAD21 homolog (S. pombe ( 643) 1829 311.9 2.9e-82 gi|73974375|ref|XP_861017.1| PREDICTED: similar to ( 581) 1813 309.2 1.6e-81 gi|209155144|gb|ACI33804.1| Double-strand-break re ( 633) 1810 308.7 2.5e-81 gi|66910708|gb|AAH97558.1| Rad21 protein [Xenopus ( 384) 1073 187.3 5.2e-45 gi|47224078|emb|CAG12907.1| unnamed protein produc ( 651) 1008 176.8 1.3e-41 gi|210083489|gb|EEA32088.1| hypothetical protein B ( 614) 598 109.4 2.4e-21 gi|210131896|gb|EEA79563.1| hypothetical protein B ( 422) 585 107.1 8.1e-21 gi|198412375|ref|XP_002125939.1| PREDICTED: simila ( 416) 579 106.1 1.6e-20 gi|193783639|dbj|BAG53550.1| unnamed protein produ ( 181) 532 98.1 1.8e-18 gi|115762662|ref|XP_780787.2| PREDICTED: similar t ( 610) 530 98.2 5.6e-18 gi|215505742|gb|EEC15236.1| cohesin subunit rad21, ( 778) 527 97.8 9.5e-18 gi|156550247|ref|XP_001602260.1| PREDICTED: simila ( 744) 515 95.8 3.6e-17 gi|189234473|ref|XP_001808764.1| PREDICTED: simila ( 798) 485 90.9 1.2e-15 gi|193613266|ref|XP_001947068.1| PREDICTED: simila ( 783) 471 88.6 5.7e-15 gi|167878020|gb|EDS41403.1| DNA repair protein Rad ( 694) 461 86.9 1.6e-14 gi|193899936|gb|EDV98802.1| GH13400 [Drosophila gr ( 643) 430 81.8 5.2e-13 gi|157017400|gb|EAA09166.3| AGAP004560-PA [Anophel ( 724) 421 80.3 1.6e-12 gi|194115939|gb|EDW37982.1| GL12358 [Drosophila pe ( 709) 419 80.0 2e-12 gi|193914432|gb|EDW13299.1| GI20760 [Drosophila mo ( 640) 410 78.5 5.1e-12 gi|194166315|gb|EDW81216.1| GK11943 [Drosophila wi ( 700) 407 78.0 7.7e-12 gi|194147696|gb|EDW63394.1| GJ13343 [Drosophila vi ( 639) 403 77.3 1.1e-11 >>gi|25091102|sp|Q61550.2|RAD21_MOUSE RecName: Full=Doub (635 aa) initn: 2868 init1: 2868 opt: 2868 Z-score: 2556.9 bits: 482.7 E(): 1e-133 Smith-Waterman score: 2868; 100.000% identity (100.000% similar) in 426 aa overlap (1-426:210-635) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|250 DDMLVSTSASNLLLEPEQSTSNLNEKMNHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 540 550 560 570 580 590 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|250 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 600 610 620 630 >>gi|120537484|gb|AAI29917.1| RAD21 homolog (S. pombe) [ (635 aa) initn: 2864 init1: 2864 opt: 2864 Z-score: 2553.4 bits: 482.1 E(): 1.6e-133 Smith-Waterman score: 2864; 99.765% identity (100.000% similar) in 426 aa overlap (1-426:210-635) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::.:::::: gi|120 DDMLVSTSASNLLLEPEQSTSNLNEKMNHLEYEDQYKDDNFGEGNDGGILDDKFISNNDG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 540 550 560 570 580 590 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|120 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 600 610 620 630 >>gi|74228385|dbj|BAE24036.1| unnamed protein product [M (601 aa) initn: 2860 init1: 2860 opt: 2860 Z-score: 2550.1 bits: 481.4 E(): 2.4e-133 Smith-Waterman score: 2860; 99.765% identity (99.765% similar) in 426 aa overlap (1-426:176-601) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|742 DDMLVSTSASNLLLEPEQSTSNLNEKMNHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 150 160 170 180 190 200 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN 210 220 230 240 250 260 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 270 280 290 300 310 320 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|742 LMMWKETGGVEKLFFLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 330 340 350 360 370 380 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG 390 400 410 420 430 440 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE 450 460 470 480 490 500 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 510 520 530 540 550 560 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|742 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 570 580 590 600 >>gi|74208640|dbj|BAE37576.1| unnamed protein product [M (635 aa) initn: 2860 init1: 2860 opt: 2860 Z-score: 2549.8 bits: 481.4 E(): 2.6e-133 Smith-Waterman score: 2860; 99.765% identity (99.765% similar) in 426 aa overlap (1-426:210-635) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|742 DDMLVSTSASNLLLEPEQSTSNLNEKMNHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|742 LMMWKETGGVEKLFFLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 540 550 560 570 580 590 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|742 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 600 610 620 630 >>gi|74219960|dbj|BAE40560.1| unnamed protein product [M (635 aa) initn: 2860 init1: 2860 opt: 2860 Z-score: 2549.8 bits: 481.4 E(): 2.6e-133 Smith-Waterman score: 2860; 99.765% identity (99.765% similar) in 426 aa overlap (1-426:210-635) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|742 DDMLVSTSASNLLLEPEQSTSNLNEKMNHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|742 LMMWKETGGVEKLFFLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 540 550 560 570 580 590 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|742 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 600 610 620 630 >>gi|12836153|dbj|BAB23527.1| unnamed protein product [M (635 aa) initn: 2860 init1: 2860 opt: 2860 Z-score: 2549.8 bits: 481.4 E(): 2.6e-133 Smith-Waterman score: 2860; 99.765% identity (99.765% similar) in 426 aa overlap (1-426:210-635) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|128 DDMLVSTSASNLLLEPEQSTSNLNEEMNHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|128 LMMWKETGGVEKLFFLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 540 550 560 570 580 590 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|128 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 600 610 620 630 >>gi|1304155|dbj|BAA08408.1| pokeweed agglutinin-binding (634 aa) initn: 2296 init1: 2296 opt: 2850 Z-score: 2540.9 bits: 479.8 E(): 8e-133 Smith-Waterman score: 2850; 99.765% identity (99.765% similar) in 426 aa overlap (1-426:210-634) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|130 DDMLVSTSASNLLLEPEQSTSNLNEKMNHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 EEEE-DEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 540 550 560 570 580 590 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|130 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 600 610 620 630 >>gi|68533861|gb|AAH99200.1| RAD21 homolog (S. pombe) [R (635 aa) initn: 2823 init1: 2823 opt: 2823 Z-score: 2516.9 bits: 475.3 E(): 1.7e-131 Smith-Waterman score: 2823; 98.357% identity (99.296% similar) in 426 aa overlap (1-426:210-635) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|685 DDMLVSTSASNLLLEPEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|685 GIFDDPPALSETGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::::::: :: : ::::::::::::::::::::::::::.::::::::::::: gi|685 FENPEVPREEQQPQPQQQQAQRDVIDEPIIEEPSRLQDSVMEASRTNIEESAMPPPPPQG 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::.::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|685 VKRKAGQVDPEPAIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 540 550 560 570 580 590 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|685 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 600 610 620 630 >>gi|119612370|gb|EAW91964.1| RAD21 homolog (S. pombe), (581 aa) initn: 1950 init1: 1519 opt: 2748 Z-score: 2450.8 bits: 463.0 E(): 8.4e-128 Smith-Waterman score: 2748; 96.244% identity (98.357% similar) in 426 aa overlap (1-426:160-581) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|119 DDMLVSTTTSNLLLESEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 130 140 150 160 170 180 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::: :.::::::::::::::::::::::::::: gi|119 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMGGPDSPDSVDPVEPMPTMTDQTTLVPN 190 200 210 220 230 240 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 250 260 270 280 290 300 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 310 320 330 340 350 360 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::.:: :.:: ::::::::::::::::.::::::::.:.::::::::::: gi|119 FENPEVPREDQQQQHQQ----RDVIDEPIIEEPSRLQESVMEASRTNIDESAMPPPPPQG 370 380 390 400 410 420 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::: .:::::::::::::::::::::::::::::::::::::::::::::. gi|119 VKRKAGQIDPEPVMPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKED 430 440 450 460 470 480 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 490 500 510 520 530 540 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|119 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 550 560 570 580 >>gi|25091097|sp|O60216.2|RAD21_HUMAN RecName: Full=Doub (631 aa) initn: 1950 init1: 1519 opt: 2748 Z-score: 2450.3 bits: 463.0 E(): 8.9e-128 Smith-Waterman score: 2748; 96.244% identity (98.357% similar) in 426 aa overlap (1-426:210-631) 10 20 30 mKIAA0 EYEDQYKDDNFGEGNDGGILDDKLISNNDG :::::::::::::::::::::::::::::: gi|250 DDMLVSTTTSNLLLESEQSTSNLNEKINHLEYEDQYKDDNFGEGNDGGILDDKLISNNDG 180 190 200 210 220 230 40 50 60 70 80 90 mKIAA0 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNGSLGGPDSPDSVDPVEPMPTMTDQTTLVPN :::::::::::::::::::::::::::::: :.::::::::::::::::::::::::::: gi|250 GIFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMGGPDSPDSVDPVEPMPTMTDQTTLVPN 240 250 260 270 280 290 100 110 120 130 140 150 mKIAA0 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 EEEAFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTKK 300 310 320 330 340 350 160 170 180 190 200 210 mKIAA0 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 LMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRCLTPLVPEDLRKRRKGGEADNLDEFLKE 360 370 380 390 400 410 220 230 240 250 260 270 mKIAA0 FENPEVPREEQQPQQQQPQPQRDVIDEPIIEEPSRLQDSVMEASRTTIEESAMPPPPPQG :::::::::.:: :.:: ::::::::::::::::.::::::::.:.::::::::::: gi|250 FENPEVPREDQQQQHQQ----RDVIDEPIIEEPSRLQESVMEASRTNIDESAMPPPPPQG 420 430 440 450 460 470 280 290 300 310 320 330 mKIAA0 VKRKAGQIDPEPSIPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKEE :::::::::::: .:::::::::::::::::::::::::::::::::::::::::::::. gi|250 VKRKAGQIDPEPVMPPQQVEQMEIPPVELPPEEPPNICQLIPELELLPEKEKEKEKEKED 480 490 500 510 520 530 340 350 360 370 380 390 mKIAA0 EEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 DEEEEDEDASGGDQDQEERRWNKRTQQMLHGLQRALAKTGAESISLLELCRNTNRKQAAA 540 550 560 570 580 590 400 410 420 mKIAA0 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII :::::::::::::::::::::::::::::::::::: gi|250 KFYSFLVLKKQQAIELTQEEPYSDIIATPGPRFHII 600 610 620 630 426 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 18:37:00 2009 done: Thu Mar 12 18:43:36 2009 Total Scan time: 897.110 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]