FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0305.ptfa, 1536 aa vs ./tmplib.26680 library 1767481 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.4555+/-0.00545; mu= 18.3655+/- 0.364 mean_var=145.3605+/-34.410, 0's: 0 Z-trim: 14 B-trim: 6 in 1/35 Lambda= 0.1064 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1362 ( 1407 res) mia41047 (1407) 304 60 5.2e-09 mKIAA0647 ( 1186 res) mbg01911 (1186) 256 52 7.8e-07 mKIAA4239 ( 1059 res) mfj24184 (1059) 255 52 8.1e-07 mFLJ00274 ( 1530 res) mpf00869 (1530) 241 50 4.4e-06 mKIAA0981 ( 2117 res) mib04069 (2117) 239 50 6.6e-06 mKIAA0321 ( 2548 res) mef00119 (2548) 235 49 1.1e-05 mKIAA1643 ( 950 res) mbh04344 ( 950) 225 47 1.8e-05 mKIAA4212 ( 600 res) mbg08227 ( 600) 221 46 2.2e-05 mKIAA1537 ( 628 res) mbg18407 ( 628) 220 46 2.5e-05 mKIAA0993 ( 646 res) mbg00079 ( 646) 214 45 4.8e-05 mKIAA1255 ( 176 res) mbg10338 ( 176) 202 43 8e-05 mFLJ00238 ( 1452 res) mfj01101 (1452) 206 45 0.00018 mKIAA1589 ( 775 res) mbh04724 ( 775) 192 42 0.00055 >>mKIAA1362 ( 1407 res) mia41047 (1407 aa) initn: 300 init1: 243 opt: 304 Z-score: 254.1 bits: 59.6 E(): 5.2e-09 Smith-Waterman score: 310; 37.037% identity (41.667% ungapped) in 162 aa overlap (721-868:1175-1332) 700 710 720 730 740 mKIAA0 PDSQVSFNSNYIDIESNFEDGSSFVTANKDSLPEN-KRKESLV-LGQKQPTWVPDSEAPN :: :. .::: . :: : : :.::..: mKIAA1 SAAERDDWLEAISSSIEEYAKKRITFCPSRSLDEDSERKEEVSPLGAKAPIWIPDTRATM 1150 1160 1170 1180 1190 1200 750 760 770 780 790 800 mKIAA0 CMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLEKE-ARVCVICYETINKA--QA :: : .::.: ::::::::::. : .: . : :.::. . :::: :.. ..: : mKIAA1 CMICTSEFTLTWRRHHCRACGKIVCQACSSNKYGLDYLKGQLARVCEHCFQELQKLDHQL 1210 1220 1230 1240 1250 1260 810 820 830 840 850 mKIAA0 FERMMSPG-----GSCLKSN-HSNECATDQ---PLQETQTSSTPSPTTLPISALKQPNVE :. ::: .: :.: :: . : : ..:.. .:. .. . . mKIAA1 SPRVGSPGNHKSPSSALSSVLHSIPSGRKQKKIPAALKEVSANTEDSTMSGYLYRSKGSK 1270 1280 1290 1300 1310 1320 860 870 880 890 900 910 mKIAA0 GPCSKEQKRVWFADGILPNGEVADTTKLSSGSKRCSDDFSPVLPDVPTMINKVDRTHSPT : :..::. mKIAA1 KP----WKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKG 1330 1340 1350 1360 1370 1380 >>mKIAA0647 ( 1186 res) mbg01911 (1186 aa) initn: 282 init1: 211 opt: 256 Z-score: 215.1 bits: 52.2 E(): 7.8e-07 Smith-Waterman score: 257; 23.706% identity (25.893% ungapped) in 367 aa overlap (466-809:815-1173) 440 450 460 470 480 490 mKIAA0 CRSIFLQPVNEKKGEGKVEVEEMVISGESLESPEDASSAAAAGSPVALSAASVPEAPGPC ..:: .. . : . .. : : :. mKIAA0 PHLDSMQISPSRCTPDHSQGSLCNPPSVASQTPEPNTDLLSQDPPGSTASISHQEQPSSV 790 800 810 820 830 840 500 510 520 530 540 mKIAA0 EGLTFPSSDMDGQELDYFNIDESMRSGIL--------ISDAELD--AFLKEQCLSNSNTM : . . : . .. :. : : . ::..... .:: . : .. : mKIAA0 PDLIYKKEDAGKRGSKNGQLLENPRFGKMPLELARKPISQSQISEFSFLGSNWDSFQGMM 850 860 870 880 890 900 550 560 570 580 590 600 mKIAA0 S---AGENVNDSQLQMNQITMK--GLHDENAGDIYFNAEAGAAGENGGVGNCETSDKENT . .::.. : .. . . . : . :: . : : .. : : . .. . mKIAA0 TSFPSGETTPRRLLAYGCCSKRPSNKHIRAAGPCLGGQWAQREGMKSPV--CSSHSNGHC 910 920 930 940 950 960 610 620 630 640 650 mKIAA0 ENNGLSIGEKGAIPTERELSACQPDIRD-ELPVPSIKTQAVGGARP-----KQLLSLPPG . : . .. ...:. .:.. . ::: . . : : ..: .. : mKIAA0 TGPGGKNNRMWFSSHPKQVSSTKPSLLSCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEAG 970 980 990 1000 1010 1020 660 670 680 690 700 710 mKIAA0 TRSSKELNKPDVVDVPESEPCTANATAVSTCSADHIPDSQVSFNSNYIDIESNFEDGSSF :. : . .: .. . . :. : .:. : :. : : mKIAA0 YRQEVEQLRRQVRELQMRLDIRHCCAPPAEPPMDYEDDFTCLKESDGSDTEDFGSDHSED 1030 1040 1050 1060 1070 1080 720 730 740 750 760 770 mKIAA0 VTANKDSLPENKRKESLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCG .. . : .: ::. : :::: : .:.::. .: ..::::::: ::.:::. mKIAA0 CLSEASWEPVDK-KETEVT-----RWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCA 1090 1100 1110 1120 1130 780 790 800 810 820 830 mKIAA0 VCCNRKCKL--QYLEKEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNECATDQPLQ ::. : . : : . :: ::: :. ..: : : mKIAA0 GCCHLKLPIPDQQLYDPVLVCNSCYEHIQVSRARELMSQHLKKPIATASS 1140 1150 1160 1170 1180 840 850 860 870 880 890 mKIAA0 ETQTSSTPSPTTLPISALKQPNVEGPCSKEQKRVWFADGILPNGEVADTTKLSSGSKRCS >>mKIAA4239 ( 1059 res) mfj24184 (1059 aa) initn: 229 init1: 135 opt: 255 Z-score: 214.8 bits: 52.0 E(): 8.1e-07 Smith-Waterman score: 264; 26.246% identity (30.385% ungapped) in 301 aa overlap (696-987:781-1049) 670 680 690 700 710 720 mKIAA0 VVDVPESEPCTANATAVSTCSADHIPDSQVSFNSNYIDIESNFEDGSSFVTANKDSLPEN ..::. . :...: . . ..:.:. mKIAA4 NMPRTFLVSGKQRSLELQARTEEEKKDWVQAINSTLLKHEQTLETFKLLNSTNRDDEDTP 760 770 780 790 800 810 730 740 750 760 770 780 mKIAA0 KRKESLVLGQKQPTWVPDSEAPNCMNCQVKF-TFTKRRHHCRACGKVFCGVCCNRKCKLQ . .. ::.. :: . ..:. :: :: : ..:::::::.:::.: :: : . . .: mKIAA4 PNSPNVDLGKRAPTPIREKEVTMCMRCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLI 820 830 840 850 860 870 790 800 810 820 830 840 mKIAA0 YLE-KEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNECATDQPLQETQTSSTPSPT : . . :::. :: ... : ::.: :.:. . . . : : .:. . . mKIAA4 YDNNRSNRVCTDCYVALHGA--------PGSSPACSQHTPQ--RRRSILEKQ-ASVAAEN 880 890 900 910 850 860 870 880 890 900 mKIAA0 TLPISALKQPNVEGPCSKEQKRVWFADGILPNGEVADTTKLSSGSKRCSDDFSPVLP-DV .. : :. . : : ...:: ..:..: .. . .. :.. .: mKIAA4 SVICSFLHYMEKGG---KGWHKAWF---VVPENEPLVLYIYGAPQDVKAQRSLPLIGFEV 920 930 940 950 960 970 910 920 930 940 950 mKIAA0 --PTMINKVDRTHSPTVEKPNNGLGDIIRSEISQSPTCHTAPVER----LPGNTGTEGLP : .. :: : : : : .:..: . .: ..: . : .: mKIAA4 GPPEAGERPDRRH---VFK-------ITQSHLSWYFSPETEELQRRWMAVLGRAGRGDTF 980 990 1000 1010 1020 960 970 980 990 1000 1010 mKIAA0 MPGPFTLEDDVFVDSEEPSTPTVVPANSGLPVASISDYRLLCSVAKCVCNNISLLPDDDI ::: :: .: .: ::... . .. : mKIAA4 CPGP-TLSED----KEMEETPVAASGATAEPPEASQTRDKT 1030 1040 1050 1020 1030 1040 1050 1060 1070 mKIAA0 GLPPLLATSGEDGSVPVVQERPSHEQIILLLEGEGFPPATFVLNANLLVNVKLVLYSSEK >>mFLJ00274 ( 1530 res) mpf00869 (1530 aa) initn: 246 init1: 192 opt: 241 Z-score: 201.5 bits: 50.0 E(): 4.4e-06 Smith-Waterman score: 244; 30.769% identity (34.146% ungapped) in 182 aa overlap (724-889:1290-1469) 700 710 720 730 740 750 mKIAA0 QVSFNSNYIDIESNFEDGSSFVTANKDSLPENKRKESLVLGQKQPTWVPDSEAPNCMNCQ : ... .. ::.. :: :: ..: :::: mFLJ00 AERDEWHYCLSRALPEDYKTQALAAFHHSVEIRERLGISLGERLPTLVPVTHAMMCMNCG 1260 1270 1280 1290 1300 1310 760 770 780 790 800 mKIAA0 VKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLE-KEARVCVICYETIN------KAQAF :..: :::::.::::. : : : :. :. . :.:: :.. .. .. mFLJ00 CDFSLTVRRHHCHACGKIVCRNCSRNKYPLKCLKNRMAKVCDGCFRELKLRNGPVPGSMR 1320 1330 1340 1350 1360 1370 810 820 830 840 850 860 mKIAA0 ERMMSPGGSCLKSNHSNECATDQPLQETQTSSTPSPTTLPISALKQPNVEGPCS------ :: .: . .: :. : .. .: . :. . .: :::.. . : : mFLJ00 ERPVSMSFPLSSSRFSSGSALSSVFQSISPSTFKKQKKVP-SALSEVAASGEGSAISGYL 1380 1390 1400 1410 1420 1430 870 880 890 900 910 mKIAA0 ---KEQKRVWFADGILPNGEVADTTKLSSGSKRCSDDFSPVLPDVPTMINKVDRTHSPTV : :: : .. .:.: : :.: .: mFLJ00 SRCKSGKRRWKKLWLVIKGKVL-YTYLASEDKVAMESIPLLGFTIAPEKEEGSSEVGPVF 1440 1450 1460 1470 1480 1490 920 930 940 950 960 970 mKIAA0 EKPNNGLGDIIRSEISQSPTCHTAPVERLPGNTGTEGLPMPGPFTLEDDVFVDSEEPSTP mFLJ00 HLYHKKTLFYSFKAEDSNSAQRWMEAMEDASVL 1500 1510 1520 1530 >>mKIAA0981 ( 2117 res) mib04069 (2117 aa) initn: 263 init1: 216 opt: 239 Z-score: 198.3 bits: 49.9 E(): 6.6e-06 Smith-Waterman score: 246; 25.893% identity (30.052% ungapped) in 224 aa overlap (726-934:156-363) 700 710 720 730 740 750 mKIAA0 SFNSNYIDIESNFEDGSSFVTANKDSLPENKRKESLVLGQKQPT-----WVPDSEAPNCM :: . .. :..: . :.:::. .:. mKIAA0 VLDSRRKAEPACGGHDPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECY 130 140 150 160 170 180 760 770 780 790 800 mKIAA0 NCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYL--EKEARVCVICYETINKAQAFER .:. ::: .:::::: ::..::. :::.. ... . :.:. : . : . : mKIAA0 DCSEKFTTFRRRHHCRLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRK-IALSYAHST 190 200 210 220 230 240 810 820 830 840 850 860 mKIAA0 MMSPGGSCLKSNHSNECATDQPLQETQTSSTPSPTTLPISALKQP-NVEGPCSKEQKRVW . : :.. .. :.. . :: :... : :. :. .: mKIAA0 DSNSIGEDLNALSDSTCSV--------SILDPSEPRTPVGSRKASRNIF----LEDDLAW 250 260 270 280 290 870 880 890 900 910 920 mKIAA0 FADGILPNG-EVADTTKLSSGSKRCSDDFSPVLPDVPTMIN-KVDRTHSPTVEKPNNGLG . : :.. . : .:.: : .. . ::. .. : ..::. :: : . ..... mKIAA0 -QSLIHPDSSNSALSTRLVSVQEDAGK--SPARNRSASITNLSLDRSGSPMVPSYETSVS 300 310 320 330 340 930 940 950 960 970 980 mKIAA0 -----DIIRSEISQSPTCHTAPVERLPGNTGTEGLPMPGPFTLEDDVFVDSEEPSTPTVV . ::.: ... mKIAA0 PQANRNYIRTETTEDERKILLDSAQLKDLWKKICHHTSGMEFQDHRYWLRTHPNCIVGKE 350 360 370 380 390 400 >>mKIAA0321 ( 2548 res) mef00119 (2548 aa) initn: 275 init1: 127 opt: 235 Z-score: 194.2 bits: 49.4 E(): 1.1e-05 Smith-Waterman score: 235; 31.206% identity (33.846% ungapped) in 141 aa overlap (692-824:1764-1901) 670 680 690 700 710 mKIAA0 NKPDVVDVPESEPCTANATAVSTCSADHIPDSQVSFNSNYIDIESNFEDGSSFV---TAN ::.. :. .. . ::..: . . mKIAA0 AGKALDLPYPLREKRSDSMIHLQEPVHQASDSETLSRSSSAEFSAAAAPGSALVRSPSPK 1740 1750 1760 1770 1780 1790 720 730 740 750 760 770 mKIAA0 KDSLPENKRKESLVLGQKQPT---WVPDSEAPNCM-NCQVKFTFTKRRHHCRACGKVFCG . ..:... .: . :. :::: :: :. .::. .:::::: ::.. :: mKIAA0 ERAFPQTQPPVEFVPPETPPARDQWVPDETESVCMVCCREHFTMFNRRHHCRRCGRLVCG 1800 1810 1820 1830 1840 1850 780 790 800 810 820 830 mKIAA0 VCCNRKCKLQ-YLEKEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNECATDQPLQE : ..: .. . :. .::: :: :: : :: : . .. .:: mKIAA0 SCSTKKMVVEGFRENPTRVCDQCYSYYNKDTPEE---SPCQSEVPDSAKNESPPYSAVVR 1860 1870 1880 1890 1900 1910 840 850 860 870 880 890 mKIAA0 TQTSSTPSPTTLPISALKQPNVEGPCSKEQKRVWFADGILPNGEVADTTKLSSGSKRCSD mKIAA0 VPKATEVEWILSLSEEENELVRSEFYYEQAPSASLCIAILNLHRDSIACGHQLIEHCCRL 1920 1930 1940 1950 1960 1970 >>mKIAA1643 ( 950 res) mbh04344 (950 aa) initn: 268 init1: 186 opt: 225 Z-score: 190.4 bits: 47.3 E(): 1.8e-05 Smith-Waterman score: 225; 45.161% identity (46.667% ungapped) in 62 aa overlap (738-797:875-936) 710 720 730 740 750 760 mKIAA0 FEDGSSFVTANKDSLPENKRKESLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRA : :::: : .:.. :: .:.::::. mKIAA1 AALEDCALCQETVSSSELAAKTRDGDFEDPPEWVPDEACGFCTSCKAPFTVIRRKHHCRS 850 860 870 880 890 900 770 780 790 800 810 820 mKIAA0 CGKVFCGVCCNRKCKL-QYLE-KEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNEC :::.::. : ... : .: . : .:::. :: mKIAA1 CGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKTGM 910 920 930 940 950 830 840 850 860 870 880 mKIAA0 ATDQPLQETQTSSTPSPTTLPISALKQPNVEGPCSKEQKRVWFADGILPNGEVADTTKLS >>mKIAA4212 ( 600 res) mbg08227 (600 aa) initn: 213 init1: 213 opt: 221 Z-score: 189.1 bits: 46.4 E(): 2.2e-05 Smith-Waterman score: 221; 40.323% identity (40.323% ungapped) in 62 aa overlap (736-797:527-588) 710 720 730 740 750 760 mKIAA0 SNFEDGSSFVTANKDSLPENKRKESLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHC : ::. :.:: .: .:. :....:.::: mKIAA4 EQEQALQEMGLHLSQSKLKMEDIKEVNKALKGHTWLKDDEATHCKQCEKDFSISRRKHHC 500 510 520 530 540 550 770 780 790 800 810 820 mKIAA0 RACGKVFCGVCCNRKCKLQYLEKEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNEC : ::..::..: . . : : .::: :. mKIAA4 RNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLLLQRCSSTAS 560 570 580 590 600 830 840 850 860 870 880 mKIAA0 ATDQPLQETQTSSTPSPTTLPISALKQPNVEGPCSKEQKRVWFADGILPNGEVADTTKLS >>mKIAA1537 ( 628 res) mbg18407 (628 aa) initn: 167 init1: 167 opt: 220 Z-score: 188.1 bits: 46.3 E(): 2.5e-05 Smith-Waterman score: 220; 27.523% identity (28.302% ungapped) in 109 aa overlap (689-797:511-616) 660 670 680 690 700 710 mKIAA0 KELNKPDVVDVPESEPCTANATAVSTCSADHIPDSQVSFNSNYIDIESNFEDGSSFVTAN .. : . ... : . :. ... .: . . mKIAA1 LQEDLQKEKDVLSHLRHETQKVISLKKEFLNLQDENQQLKRIYQEQEQALQELGSKLCES 490 500 510 520 530 540 720 730 740 750 760 770 mKIAA0 KDSLPENKRKESLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCN : .. . :. .. . : .:. :..: .: :. .:...::.:::: ::..::..: . mKIAA1 KLKIDDIKEANKALQGL---VWLKDKDATHCKLCEKEFSLSKRKHHCRNCGEIFCNACSD 550 560 570 580 590 780 790 800 810 820 830 mKIAA0 RKCKLQYLEKEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNECATDQPLQETQTSS . : : .::: :. mKIAA1 NELPLPSSPKPVRVCDSCHAMLIQRCSSNMP 600 610 620 >>mKIAA0993 ( 646 res) mbg00079 (646 aa) initn: 201 init1: 170 opt: 214 Z-score: 183.0 bits: 45.4 E(): 4.8e-05 Smith-Waterman score: 214; 37.143% identity (38.235% ungapped) in 70 aa overlap (740-807:571-640) 710 720 730 740 750 760 mKIAA0 DGSSFVTANKDSLPENKRKESLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACG :: : . .: .:.:.:..:.:::::: :: mKIAA0 DHSRILVGDSRGRVFSWSVSDQPGRSAADHWVKDEGGDSCSGCSVRFSLTERRHHCRNCG 550 560 570 580 590 600 770 780 790 800 810 820 mKIAA0 KVFCGVCCNRKCKLQYLE--KEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNECAT ..:: : . ... :. . .::: :: .... .. : mKIAA0 QLFCQKCSRFQSEIKRLKISSPVRVCQNCYYSLQHERGAEDGPRNC 610 620 630 640 830 840 850 860 870 880 mKIAA0 DQPLQETQTSSTPSPTTLPISALKQPNVEGPCSKEQKRVWFADGILPNGEVADTTKLSSG 1536 residues in 1 query sequences 1767481 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:17:07 2006 done: Mon Mar 27 10:17:09 2006 Scan time: 1.310 Display time: 0.580 Function used was FASTA [version 3.4t11 Apr 17, 2002]