FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0893.ptfa, 1132 aa vs ./tmplib.26680 library 1767885 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.8418+/-0.0061; mu= 8.4706+/- 0.405 mean_var=195.4072+/-46.821, 0's: 0 Z-trim: 12 B-trim: 0 in 0/36 Lambda= 0.0917 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4167 ( 342 res) mpj04828 ( 342) 234 44 4.9e-05 mKIAA1942 ( 431 res) mej02524 ( 431) 219 42 0.00022 mKIAA0596 ( 1070 res) mbg02022 (1070) 221 43 0.00033 mKIAA4156 ( 368 res) mfj52041 ( 368) 197 39 0.0015 mKIAA1449 ( 675 res) mbg03116 ( 675) 197 39 0.0022 >>mKIAA4167 ( 342 res) mpj04828 (342 aa) initn: 152 init1: 114 opt: 234 Z-score: 182.8 bits: 44.0 E(): 4.9e-05 Smith-Waterman score: 293; 25.641% identity (29.032% ungapped) in 351 aa overlap (788-1129:21-339) 760 770 780 790 800 810 mKIAA0 NPGSTNHIPFHEDSPCGSQNSSEHSVIKPSPGDSSGNLSRSKGEEDDKSKKQFVCINTLE :.. . .: . .:.. .: ... :: mKIAA4 VSGREARANYRAGSMATEHLPAERAQSLLSAPRREEEPQKPNYALRLTLA 10 20 30 40 50 820 830 840 850 860 870 mKIAA0 D-TQAVRAVAFHPSGSLYAVGSNSKTLRVCAYPEKMDASAHD-NPKQPVVRFKRNKHHKG . :. .: : :.: : .. . . . .:.: : :. . :. mKIAA4 GHSAAISSVKFSPNGEWLASSAADALIII--------WGAYDGNCKKTLY------GHSL 60 70 80 90 880 890 900 910 920 930 mKIAA0 SIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPES : :::: .. :...:.:: .:: . . : : .. :. . : .: : mKIAA4 EISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKT-----LKGHSDFVFCCDF--NPPS 100 110 120 130 140 940 950 960 970 980 990 mKIAA0 GGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILAL-YTWSGWMIASGSQDKTVRFW . :: .:. : .. . . :. :..::.:. : :. .. .: .:.::: : :.: mKIAA4 N---LIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIW 150 160 170 180 190 200 1000 1010 1020 1030 1040 1050 mKIAA0 DLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPH : .:.:... .:. :. : .:.:. . :. :.. :.: :: ...: : mKIAA4 DAASGQCLRTLAD--EGN-PPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGH 210 220 230 240 250 260 1060 1070 1080 1090 1100 1110 mKIAA0 SSDVRSV--RFS-PGAHYLLTGSYDMKIKVTDLQGDLTKQLPLMVVGEHKDKVIQCRWHT ... . :: : .....:: : . . .:: ::.. . : : : ::. : mKIAA4 KNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQ---TKEIVQRLQG-HTDVVISAACHP 270 280 290 300 310 1120 1130 mKIAA0 QDLSFLSSSA---DRTVTLWTYSG ....:.: :.:. .:. mKIAA4 TK-NIIASAALENDKTIKVWSSDC 320 330 340 >>mKIAA1942 ( 431 res) mej02524 (431 aa) initn: 161 init1: 59 opt: 219 Z-score: 170.9 bits: 42.1 E(): 0.00022 Smith-Waterman score: 219; 28.421% identity (30.682% ungapped) in 190 aa overlap (950-1128:180-366) 920 930 940 950 960 970 mKIAA0 HDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQ-RGQGLHALSGHTGHILALYTWS :. : : : . . ...:: :. .:: :: mKIAA1 VAGVWSEKGQVEVFALRRLLQVVDDPQALAIFLRDEQARIKPIFSFAGHMGEGFAL-DWS 150 160 170 180 190 200 980 990 1000 1010 1020 1030 mKIAA0 ----GWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPS-GRLLATGQE : .. .:. .:.:..: . : : : .: .. .:. ..:. . mKIAA1 PRVPGRLL-TGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSA 210 220 230 240 250 260 1040 1050 1060 1070 1080 mKIAA0 DSSCMLYDIRG--GR--MVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLT :.: ..:::. :. :. . :..:: . .: .::.:. : .:: ::. .. mKIAA1 DASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGALKVWDLR-QFK 270 280 290 300 310 320 1090 1100 1110 1120 1130 mKIAA0 KQLPLMVVGEHKDKVIQCRWHTQDLS-FLSSSADRTVTLWTYSG . :. . .: : . .:: :: . : .:.:: .: : mKIAA1 SGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESGETETDPGLA 330 340 350 360 370 380 mKIAA1 ALPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTISV 390 400 410 420 430 >>mKIAA0596 ( 1070 res) mbg02022 (1070 aa) initn: 179 init1: 105 opt: 221 Z-score: 167.9 bits: 42.9 E(): 0.00033 Smith-Waterman score: 241; 26.481% identity (30.159% ungapped) in 287 aa overlap (815-1089:38-301) 790 800 810 820 830 840 mKIAA0 KPSPGDSSGNLSRSKGEEDDKSKKQFVCINTLEDTQA-VRAVAFHPSGSLYAVGSNSKTL .: : .. .:.: . :.:. : :. :: mKIAA0 HQDLIKIIYVDGNTQALLDTELPGGDKADGSLMDPRVGIRSVCISPNGQHLASGDRMGTL 10 20 30 40 50 60 850 860 870 880 890 900 mKIAA0 RVCAYPEKMDASAHDNPKQPVVRFKRNKHHKGSIYCVAWS-P-CG-QLLATGSNDKYVKV :. :. : . .. . . : . : :. .: : : .:::..: :. ..: mKIAA0 RI-----------HE--LQSLSEMLKVEAHDSEILCLEYSKPDTGLKLLASASRDRLIHV 70 80 90 100 110 910 920 930 940 950 mKIAA0 LPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQR-GQ : . : : :...: . : . .: . .:: :: : .:: :. :. mKIAA0 LDAGREYSLQQTLD----EHSSSITAVKFAAS--DGQVRMISCGA-DKSIYFRTAQKSGE 120 130 140 150 160 960 970 980 990 1000 1010 mKIAA0 GLHALSGHTGHIL---ALYTWS---GW-MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGT :.. : :.. .:: . .: . : : ::...:.... . .. . .: mKIAA0 GVQFTRTH--HVVRKTTLYDMDVEPSWKYTAIGCQDRNIRIFNISSGKQKKLFKGS-QGE 170 180 190 200 210 220 1020 1030 1040 1050 1060 1070 mKIAA0 GSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLT ... .: .:::: .::. :.. ..:. .:. : .. :: : ...:: ..:.. mKIAA0 DGTLIKVQTDPSGIYIATSCSDKNLSIFDFSSGECVATMFGHSEIVTGMKFSNDCKHLIS 230 240 250 260 270 280 1080 1090 1100 1110 1120 1130 mKIAA0 GSYDMKIKVTDLQGDLTKQLPLMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLWTYSG : : : : :....: mKIAA0 VSGDSCIFVWRLSSEMTISMRQRLAELRQRQRGIKQQGPTSPQRASGAKQHHAPVVPPSG 290 300 310 320 330 340 >>mKIAA4156 ( 368 res) mfj52041 (368 aa) initn: 221 init1: 104 opt: 197 Z-score: 156.0 bits: 39.1 E(): 0.0015 Smith-Waterman score: 197; 22.601% identity (25.172% ungapped) in 323 aa overlap (820-1128:18-321) 790 800 810 820 830 840 mKIAA0 DSSGNLSRSKGEEDDKSKKQFVCINTLEDTQAVRAVAFHPSGSLYAVGSNSKTLRVCAYP ...:... : ...: . . : mKIAA4 GRGRGSPTVSRPSVRLQRGARTAGVGPEQPARSLASRPRPGPAPPLP 10 20 30 40 850 860 870 880 890 900 mKIAA0 EKMDASAHDNPKQPVVR-FKRNK---HHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNA :.: . . :.: :. : ... .: : .:: :. . ..:.: . :: mKIAA4 SAAAAAAAMKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSI-VL---- 50 60 70 80 90 100 910 920 930 940 950 960 mKIAA0 ETCNATGPD-LEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHAL :. : .: . :. :: .. ....... :.. : .: . . .. .. . mKIAA4 YDCQEGKPKRTLYSKKYGV--DL--IRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYF 110 120 130 140 150 970 980 990 1000 1010 1020 mKIAA0 SGHTGHILAL-YTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDP ::. ...:: .. . ::: :::.:.:::: :.: .. : :. : : :: mKIAA4 PGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLM----HLQGKPVCSF--DP 160 170 180 190 200 210 1030 1040 1050 1060 1070 mKIAA0 SGRLLATGQEDSSCMLYDIRG---GRMV--QSYHPHSSDVRSVRFSPGAHYLLTGSYDMK : ..:.: .. :::.:. : .. . . .. . ...:: .. .: .. mKIAA4 EGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSF 220 230 240 250 260 270 1080 1090 1100 1110 1120 1130 mKIAA0 IKVTD-LQGDLTKQLPLMVVGEHKDKVIQCRWH-TQDLSF-LSSSADRTVTLWTYSG :.. : ..: . . . : ..:.. . : : .: . .: : . .:. mKIAA4 IRLIDAFKGVVMHTFG----GYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIK 280 290 300 310 320 mKIAA4 VAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 330 340 350 360 >>mKIAA1449 ( 675 res) mbg03116 (675 aa) initn: 58 init1: 58 opt: 197 Z-score: 153.0 bits: 39.4 E(): 0.0022 Smith-Waterman score: 210; 23.100% identity (26.573% ungapped) in 329 aa overlap (818-1132:28-327) 790 800 810 820 830 840 mKIAA0 PGDSSGNLSRSKGEEDDKSKKQFVCINTLEDTQAVRAVAFHPS-GSLYAVGSNSKTLRVC . ..: :. . :. . :...: .: .:. mKIAA1 AAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDS-IIRI- 10 20 30 40 50 850 860 870 880 890 900 mKIAA0 AYPEKMDASAHDNPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAE :.... ..: . .:: . :. :. : ..:.: ::: . mKIAA1 -------WSVNQHKQDPYI--ASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKG 60 70 80 90 100 910 920 930 940 950 960 mKIAA0 TCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHA--- : .: . : .. ::. . : .. ::: : .:. : . .: : mKIAA1 FCMST-----LRTHKDYVKALAYAKDKE----LVASAGL-DRQIFLWDVNTLTALTASNN 110 120 130 140 150 970 980 990 1000 1010 mKIAA0 ------LSGHTGHILAL-YTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAV :::. : .: .. : .:.::: .:..: :: : .:.... ..: . : mKIAA1 TVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPR--TCAKLM--KLKGHTDNV 160 170 180 190 200 210 1020 1030 1040 1050 1060 1070 mKIAA0 ASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYD .. . .: .:. :.. :. . : . .:. :. : ... . . .. .:. : mKIAA1 KALLLHRDGTQCLSGSSDGTIRLWFLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRD 220 230 240 250 260 270 1080 1090 1100 1110 1120 1130 mKIAA0 MKIKVTDLQGDLTKQLPLMVVGEHKDKVIQC---RWHTQDLSFLSSSADRTVTLWTYSG :: :::.. . : . :.: :.. : .. ... ::. :: .: mKIAA1 RKIYCTDLRNPDIRVL----ICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGI 280 290 300 310 320 mKIAA1 HNFRASGDYDNDCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDV 330 340 350 360 370 380 1132 residues in 1 query sequences 1767885 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:31:22 2006 done: Mon Mar 27 10:31:23 2006 Scan time: 1.110 Display time: 0.160 Function used was FASTA [version 3.4t11 Apr 17, 2002]