Miyakogusa Predicted Gene
- Lj6g3v2272140.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K125_SOYBN |
86.3 |
33.5 |
50.0 |
(tr|I1K125) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G06240.1 |
48.1 |
23.2 |
42.9 |
| Symbols: | F-box family protein | chr3:1887336-1888619 FORWARD LENGTH=427 |
| Medicago |
Medtr4g013180.1 |
82.4 |
35.5 |
48.2 |
| F-box protein interaction domain protein | LC | chr4:3561973-3560274 | 20130731 |
| Soybean |
Glyma05g06300.1 |
86.3 |
33.5 |
50.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v2272140.1 |
length: 190 aa. |
| IPR006527 |
F-box associated domain, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07734 |
FBA_1 |
8.7e-05 |
97-186 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
1.6e-12 |
6-187 |
- Wolf-PSORT
Lj6g3v2272140.1 cyto 7, extr 3, cysk 2, nucl 1, golg 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v2272140.1 |
|