Miyakogusa Predicted Gene

Lj6g3v2193690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S139_LOTJA 684 86.7 86.9 (tr|I3S139) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G72220.1 159 54.1 68.9 | Symbols: | RING/U-box superfamily protein | chr1:27184388-27185629 REVERSE LENGTH=413
Medicago Medtr2g009310.1 310 46.1 56.0 | RING-H2 zinc finger protein | HC | chr2:1866319-1867959 | 20130731
Soybean Glyma08g18870.1 321 53.7 61.1  
LJGI gnl|LJGI|TC60131 2307 98.5 98.5 similar to UniRef100_A7Q662 Cluster: Chromosome undetermined scaffold_55, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_55, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2193690.1 length: 405 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 2e-15 170-215
HMMSmart SM00184 Ring 2.2e-07 171-212
ProfileScan PS50089 ZF_RING_2 12.917 171-213
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.2e-18 168-217
no_ID  
HMMPanther PTHR14155 RING 3.7e-37 132-232
HMMPanther PTHR14155:SF18 SUBFAMILY 3.7e-37 132-232
Seg seg seg NA 20-31
42-62
68-73
244-255
superfamily SSF57850 RING/U-box 1.8e-21 165-238
Wolf-PSORT
Lj6g3v2193690.1	chlo 6, extr 2, E.R. 2, nucl 1, mito 1, plas 1, vacu 1, nucl_plas 1, mito_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2193690.1