Miyakogusa Predicted Gene

Lj6g3v1955280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ILW5_MEDTR 282 84.9 88.6 (tr|G7ILW5) ABC transporter B family member OS=Medicago truncatula GN=MTR_2g018320 PE=3 SV=1
TAIR_pep AT4G18050.1 259 76.5 84.9 | Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205-10027280 FORWARD LENGTH=1236
Medicago Medtr2g018320.1 282 84.9 88.6 | ABC transporter B family-like protein | HC | chr2:5763292-5769070 | 20130731
Soybean Glyma13g29380.1 261 79.1 86.5  
LJGI gnl|LJGI|FS350102 165 88.4 88.4 similar to UniRef100_A7QQI4 Cluster: Chromosome undetermined scaffold_143, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_143, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1955280.1 length: 166 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.9e-17 2-91
ProfileScan PS50893 ABC_TRANSPORTER_2 8.630 4-160
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 63-77
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.5e-38 1-146
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.8e-50 1-152
HMMPanther PTHR24222 FAMILY 8.3e-121 1-166
HMMPanther PTHR24222:SF3 SUBFAMILY 8.3e-121 1-166
Seg seg seg NA 28-41
Wolf-PSORT
Lj6g3v1955280.1	cyto 5, cysk 5, extr 2, chlo 1, mito 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1955280.1