Miyakogusa Predicted Gene

Lj6g3v1887890.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MFB8_SOYBN 319 49.6 60.4 (tr|I1MFB8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G23880.1 162 32.5 50.7 | Symbols: | F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364
Medicago Medtr2g021190.1 313 47.6 59.3 | F-box protein interaction domain protein | HC | chr2:7169701-7168089 | 20130731
Soybean Glyma15g10860.1 319 49.6 60.4  
LJGI gnl|LJGI|TC65255 291 90.5 90.5 similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box; F-box protein interaction domain; n=1; Medicago truncatula|Rep: Cyclin-like F-box; F-box protein interaction domain - Medicago truncatula (Barrel medic), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1887890.1 length: 408 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2e-10 29-70
HMMSmart SM00256 A 6.3e-11 29-69
ProfileScan PS50181 FBOX 11.008 23-69
superfamily SSF81383 F-box 9.8e-19 16-242
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 9.1e-35 146-374
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 3.3e-10 27-65
HMMPanther PTHR32133 FAMILY 4.8e-24 24-287
Seg seg seg NA 175-186
211-226
Wolf-PSORT
Lj6g3v1887890.1	nucl 7.5, cyto_nucl 7, cyto 5.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1887890.1