Miyakogusa Predicted Gene

Lj6g3v1585630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N3A3_SOYBN 671 69.8 77.5 (tr|I1N3A3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G00231.1 410 47.4 66.4 | Symbols: MEE50 | ARM repeat superfamily protein | chr4:97528-99050 FORWARD LENGTH=475
Medicago Medtr7g075940.1 613 62.9 75.5 | ARM repeat protein | HC | chr7:28543135-28539537 | 20130731
Soybean Glyma18g44790.1 671 69.8 77.5  
LJGI gnl|LJGI|TC76401 1011 99.8 99.8 similar to UniRef100_A7QB62 Cluster: Chromosome chr4 scaffold_73, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_73, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1585630.1 length: 492 aa.
IPR011989 Armadillo-like helical
method AccNumber shortName E-value location
Gene3D G3DSA:1.25.10.10 no description 5.5e-15 309-457
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 5.5e-08 18-202
256-456
IPR019156 Ataxin-10 domain
HMMPfam PF09759 Atx10homo_assoc 1.6e-30 387-483
no_ID  
HMMPanther PTHR13255 ATAXIN-10 1.2e-63 1-490
HMMPanther PTHR13255:SF0 SUBFAMILY 1.2e-63 1-490
Seg seg seg NA 17-38
341-358
Wolf-PSORT
Lj6g3v1585630.1	nucl 4, cyto 4, cyto_nucl 4, plas 2, vacu 2, E.R. 2, cysk_nucl 2, E.R._vacu 2, cyto_pero 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1585630.1