| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7MBB4_SOYBN | 2681 | 76.0 | 81.9 | (tr|K7MBB4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT5G49430.1 | 1693 | 54.3 | 66.2 | | Symbols: | WD40/YVTN repeat-like-containing domain;Bromodomain | chr5:20037338-20045454 REVERSE LENGTH=1677 |
| Medicago | Medtr2g034500.1 | 2519 | 75.6 | 82.7 | | WD40/YVTN repeat containing domain; bromodomain protein | HC | chr2:13169883-13184309 | 20130731 |
| Soybean | Glyma09g04210.1 | 2597 | 75.7 | 82.2 | |
| LJGI | gnl|LJGI|TC81685 | 1217 | 100.0 | 100.0 | similar to UniRef100_A2Q283 Cluster: Cytochrome cd1-nitrite reductase-like, C-terminal haem d1; n=1; Medicago truncatula|Rep: Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 - Medicago truncatula (Barrel medic), partial (11%) |
| Lj6g3v1559380.1 | length: 1727 aa. | |||
| IPR001487 | Bromodomain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.20.920.10 | no description | 1.2e-06 | 1667-1724 |
| HMMPfam | PF00439 | Bromodomain | 1.3e-05 | 1661-1711 |
| superfamily | SSF47370 | Bromodomain | 3.6e-08 | 1618-1726 |
| IPR001680 | WD40 repeat | |||
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00400 | WD40 | 1.6e-05 | 238-272 278-313 319-359 393-420 |
| HMMSmart | SM00320 | WD40 | 0.0044 | 233-272 275-314 317-359 382-420 432-497 530-568 571-611 |
| ProfileScan | PS50082 | WD_REPEATS_2 | 9.907 | 240-281 282-323 324-368 388-420 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:2.130.10.10 | no description | 2.5e-21 | 228-490 491-660 |
| IPR017986 | WD40-repeat-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 13.106 | 240-429 536-620 |
| superfamily | SSF50978 | WD40 | 1.7e-62 | 232-657 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 346-360 555-569 598-612 |
| no_ID | ||||
| HMMPanther | PTHR16266 | WD | 0 | 40-1724 |
| HMMPanther | PTHR16266:SF16 | BROMODOMAIN-CONTAINING | 0 | 40-1724 |
| Seg | seg | seg | NA | 292-306 374-392 519-535 794-814 1313-1329 1627-1638 |
Lj6g3v1559380.1 nucl 11, cysk 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v1559380.1 |