Miyakogusa Predicted Gene

Lj6g3v1559270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MGH0_SOYBN 1322 71.2 78.9 (tr|I1MGH0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G16150.1 997 56.6 68.5 | Symbols: | calmodulin binding;transcription regulators | chr4:9148225-9153048 FORWARD LENGTH=923
Medicago Medtr2g034650.1 1341 71.6 79.5 | calmodulin-binding transcription activator | HC | chr2:13262185-13256129 | 20130731
Soybean Glyma15g15350.1 1277 68.6 76.3  
LJGI gnl|LJGI|TC78750 1933 99.8 99.8 similar to UniRef100_O23463 Cluster: Calmodulin-binding transcription activator 5; n=1; Arabidopsis thaliana|Rep: Calmodulin-binding transcription activator 5 - Arabidopsis thaliana (Mouse-ear cress), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1559270.1 length: 907 aa.
IPR000048 IQ motif, EF-hand binding site
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00612 IQ 0.079 777-797
857-876
HMMSmart SM00015 Short 19 752-774
775-797
855-877
ProfileScan PS50096 IQ 7.876 753-779
776-800
857-885
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 2.1e+03 588-617
627-658
ProfileScan PS50088 ANK_REPEAT 11.194 588-620
IPR005559 CG-1 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03859 CG-1 9.3e-47 30-146
HMMSmart SM01076 no description 5e-72 28-146
ProfileScan PS51437 CG_1 75.815 25-151
IPR013783 Immunoglobulin-like fold
Gene3D G3DSA:2.60.40.10 no description 0.00064 335-440
IPR014756 Immunoglobulin E-set
superfamily SSF81296 E 1.2e-18 351-438
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 1.4e-14 546-650
HMMPfam PF12796 Ank_2 7.1e-08 552-617
ProfileScan PS50297 ANK_REP_REGION 15.300 555-620
superfamily SSF48403 Ankyrin 3.3e-18 526-648
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 0.0023 701-807
809-887
no_ID  
HMMPanther PTHR23335 CALMODULIN-BINDING 4.3e-191 1-894
Seg seg seg NA 151-169
286-298
322-338
695-712
853-863
888-896
Wolf-PSORT
Lj6g3v1559270.1	nucl 7, pero 5, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1559270.1