Miyakogusa Predicted Gene

Lj6g3v0936950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IQ97_MEDTR 1148 70.5 82.8 (tr|G7IQ97) Disease resistance-like protein GS4-1 OS=Medicago truncatula GN=MTR_2g040230 PE=4 SV=1
TAIR_pep AT5G17680.1 493 37.9 57.5 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr2g040230.1 1148 70.5 82.8 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr2:17650494-17654963 | 20130731
Soybean Glyma12g36880.1 949 66.2 77.2  
LJGI gnl|LJGI|DC599911 1017 98.5 98.5 weakly similar to UniRef100_A7PQB6 Cluster: Chromosome chr18 scaffold_24, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_24, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0936950.1 length: 813 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 9.5e-32 21-152
HMMSmart SM00255 Toll 5.7e-38 18-158
ProfileScan PS50104 TIR 25.572 17-158
superfamily SSF52200 Toll/Interleukin 4.2e-39 7-161
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1.7e-25 221-236
297-311
389-403
695-711
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 1.7e-48 203-465
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.3e-31 179-426
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 3.6e-19 16-149
Gene3D G3DSA:3.40.50.300 no description 3.8e-11 212-370
Gene3D G3DSA:3.80.10.10 no description 1.2e-22 557-773
HMMPanther PTHR11017 LEUCINE-RICH 1.4e-220 9-768
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 1.4e-220 9-768
Seg seg seg NA 199-219
293-307
superfamily SSF46785 "Winged 5.8e-23 424-531
superfamily SSF52058 L 1.6e-33 526-787
Wolf-PSORT
Lj6g3v0936950.1	nucl 7, cyto 3, chlo 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0936950.1