Miyakogusa Predicted Gene
- Lj6g3v0775970.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N0C0_SOYBN |
528 |
68.0 |
81.8 |
(tr|I1N0C0) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G47530.1 |
323 |
43.9 |
64.9 |
| Symbols: | Auxin-responsive family protein | chr5:19281471-19282870 FORWARD LENGTH=395 |
| Medicago |
Medtr3g058510.1 |
433 |
59.0 |
74.6 |
| auxin-responsive family protein, putative | LC | chr3:23252617-23253864 | 20130731 |
| Soybean |
Glyma18g08860.1 |
526 |
68.9 |
82.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0775970.1 |
length: 385 aa. |
| IPR005018 |
DOMON domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMSmart |
SM00664 |
Possible |
1.1e-19 |
46-192 |
| ProfileScan |
PS50836 |
DOMON |
15.926 |
47-161 |
| IPR006593 |
Cytochrome b561/ferric reductase transmembrane |
| HMMSmart |
SM00665 |
Cytochrome |
1.2e-19 |
209-334 |
| ProfileScan |
PS50939 |
CYTOCHROME_B561 |
28.131 |
168-368 |
| IPR017214 |
Uncharacterised conserved protein UCP037471 |
| HMMPfam |
PF04526 |
DUF568 |
8.7e-35 |
88-187 |
| no_ID |
|
| HMMPanther |
PTHR23130 |
FAMILY |
1.6e-100 |
23-363 |
| HMMPanther |
PTHR23130:SF19 |
HYPOTHETICAL |
1.6e-100 |
23-363 |
| Seg |
seg |
seg |
NA |
3-19 |
- Wolf-PSORT
Lj6g3v0775970.1 plas 5, vacu 3, golg_plas 3, mito_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0775970.1 |
|