Miyakogusa Predicted Gene

Lj6g3v0670020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MQF1_SOYBN 678 84.0 87.8 (tr|K7MQF1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G13235.2 609 74.3 82.7 | Symbols: | ubiquitin family protein | chr3:4271492-4274348 REVERSE LENGTH=414
Medicago --No_Hits--        
Soybean Glyma08g44820.1 625 89.2 92.7  
LJGI gnl|LJGI|TC61750 2212 97.8 97.8 similar to UniRef100_A7Q9H3 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0670020.1 length: 400 aa.
IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00627 UBA 1.3e-07 373-400
IPR000626 Ubiquitin
Molecular Function GO:0005515 protein binding    
HMMPfam PF00240 ubiquitin 6.1e-13 7-71
HMMSmart SM00213 Ubiquitin 5e-12 1-72
IPR009060 UBA-like
Molecular Function GO:0005515 protein binding    
superfamily SSF46934 UBA-like 3.8e-06 344-399
IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
ProfileScan PS50030 UBA 11.101 367-400
IPR019103 Aspartic peptidase, DDI1-type
Molecular Function GO:0004190 aspartic-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
HMMPfam PF09668 Asp_protease 1.7e-53 179-301
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 17.888 1-76
IPR019956 Ubiquitin subgroup
FPrintScan PR00348 UBIQUITIN 5.2e-05 11-31
32-52
IPR021109 Aspartic peptidase
superfamily SSF50630 Acid 5.3e-27 185-303
no_ID  
Coil coil coiled-coil NA 134-155
Gene3D G3DSA:1.10.8.10 no description 2e-06 372-400
Gene3D G3DSA:3.10.20.90 no description 5.3e-18 1-81
HMMPanther PTHR12917 ASPARTYL 1.1e-158 1-400
HMMPanther PTHR12917:SF1 DNA-DAMAGE 1.1e-158 1-400
Seg seg seg NA 71-84
355-371
superfamily SSF54236 Ubiquitin-like 2.5e-19 1-90
Wolf-PSORT
Lj6g3v0670020.1	cyto 11, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0670020.1