Miyakogusa Predicted Gene

Lj6g3v0247680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XDY2_PRUPE 457 92.2 96.1 (tr|M5XDY2) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005242mg PE=4 SV=1
TAIR_pep AT4G13930.1 442 89.2 94.8 | Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471
Medicago Medtr3g084310.1 455 91.8 95.3 | serine transhydroxymethyltransferase | HC | chr3:38069696-38067331 | 20130731
Soybean Glyma08g11490.2 452 91.8 95.3  
LJGI gnl|LJGI|TC65969 1312 100.0 100.0 homologue to UniRef100_A9PL04 Cluster: Serine hydroxymethyltransferase; n=1; Populus tremuloides|Rep: Serine hydroxymethyltransferase - Populus tremuloides (Quaking aspen), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0247680.1 length: 272 aa.
IPR001085 Serine hydroxymethyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0004372 glycine hydroxymethyltransferase activity    
Biological Process GO:0006544 glycine metabolic process    
Biological Process GO:0006563 L-serine metabolic process    
HMMPanther PTHR11680 SERINE 3.2e-161 1-227
HMMPfam PF00464 SHMT 7.2e-105 12-234
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1.3e-66 41-232
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1.7e-91 5-227
no_ID  
HMMPanther PTHR11680:SF0 SUBFAMILY 3.2e-161 1-227
Wolf-PSORT
Lj6g3v0247680.1	nucl 7, cyto 5, plas 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0247680.1