Miyakogusa Predicted Gene
- Lj6g3v0215830.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MYI4_SOYBN |
271 |
85.1 |
93.5 |
(tr|I1MYI4) DNA polymerase alpha subunit B OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT1G67630.1 |
223 |
67.9 |
84.0 |
| Symbols: POLA2 | DNA polymerase alpha 2 | chr1:25344573-25348287 REVERSE LENGTH=620 |
| Medicago |
Medtr3g085750.1 |
259 |
80.8 |
88.5 |
| DNA polymerase alpha subunit B | HC | chr3:38804725-38799088 | 20130731 |
| Soybean |
Glyma11g37330.1 |
270 |
84.4 |
92.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0215830.1 |
length: 157 aa. |
| IPR007185 |
DNA polymerase alpha/epsilon, subunit B |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Molecular Function |
GO:0003887 |
DNA-directed DNA polymerase activity |
|
|
| Biological Process |
GO:0006260 |
DNA replication |
|
|
| HMMPfam |
PF04042 |
DNA_pol_E_B |
1.2e-23 |
3-137 |
| no_ID |
|
| HMMPanther |
PTHR23061 |
DNA |
2.3e-79 |
1-156 |
| HMMPanther |
PTHR23061:SF17 |
SUBFAMILY |
2.3e-79 |
1-156 |
- Wolf-PSORT
Lj6g3v0215830.1 cyto 4, chlo 3, cyto_plas 3, mito 2, plas 2, cysk_nucl 2, cyto_pero 2, mito_plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0215830.1 |
|