Miyakogusa Predicted Gene
- Lj6g3v0204550.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N1X8_SOYBN |
125 |
68.8 |
75.0 |
(tr|K7N1X8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G24015.1 |
62.8 |
55.8 |
86.0 |
| Symbols: | RING/U-box superfamily protein | chr4:12469887-12471197 REVERSE LENGTH=174 |
| Medicago |
Medtr3g081030.1 |
113 |
65.6 |
69.8 |
| RING-H2 zinc finger protein | HC | chr3:36701768-36703963 | 20130731 |
| Soybean |
Glyma05g36680.1 |
94.4 |
64.1 |
75.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0204550.1 |
length: 96 aa. |
| IPR001841 |
Zinc finger, RING-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| HMMPfam |
PF13639 |
zf-RING_2 |
2.7e-11 |
2-35 |
| ProfileScan |
PS50089 |
ZF_RING_2 |
9.465 |
11-34 |
| IPR013083 |
Zinc finger, RING/FYVE/PHD-type |
| Gene3D |
G3DSA:3.30.40.10 |
no description |
5.7e-11 |
3-37 |
| no_ID |
|
| HMMPanther |
PTHR14155 |
RING |
1e-13 |
3-61 |
| superfamily |
SSF57850 |
RING/U-box |
4.4e-11 |
2-40 |
- Wolf-PSORT
Lj6g3v0204550.1 chlo 5, cyto 4, nucl 3, plas 1, extr 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0204550.1 |
|