Miyakogusa Predicted Gene

Lj6g3v0084290.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KJF2_SOYBN 507 83.2 89.2 (tr|I1KJF2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G05170.1 404 67.1 78.2 | Symbols: ATVPS11, VPS11 | vacuolar protein sorting 11 | chr2:1870020-1873278 FORWARD LENGTH=932

Medicago Medtr1g019500.2 502 81.8 87.2 | vacuolar protein sorting-associated-like protein | HC | chr1:5894248-5901376 | 20130731

Soybean Glyma07g13120.1 507 83.2 89.2

LJGI --No_Hits--

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v0084290.1 length: 300 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR23323 VACUOLAR 6.4e-77 1-283

HMMPanther PTHR23323:SF24 VACUOLAR 6.4e-77 1-283

Wolf-PSORT

Lj6g3v0084290.1 nucl 6, cyto 6, cyto_nucl 6

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v0084290.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KJF2_SOYBN	507	83.2	89.2	(tr\|I1KJF2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G05170.1	404	67.1	78.2	\| Symbols: ATVPS11, VPS11 \| vacuolar protein sorting 11 \| chr2:1870020-1873278 FORWARD LENGTH=932
Medicago	Medtr1g019500.2	502	81.8	87.2	\| vacuolar protein sorting-associated-like protein \| HC \| chr1:5894248-5901376 \| 20130731
Soybean	Glyma07g13120.1	507	83.2	89.2
LJGI	--No_Hits--

no_ID
Lj6g3v0084290.1				length: 300 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR23323	VACUOLAR	6.4e-77	1-283
HMMPanther	PTHR23323:SF24	VACUOLAR	6.4e-77	1-283