Miyakogusa Predicted Gene

Lj5g3v2256170.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ZYS2_MEDTR 348 93.1 98.9 (tr|G7ZYS2) Coatomer subunit delta OS=Medicago truncatula GN=MTR_077s0036 PE=4 SV=1
TAIR_pep AT5G05010.2 277 74.0 84.7 | Symbols: | clathrin adaptor complexes medium subunit family protein | chr5:1477137-1479872 FORWARD LENGTH=527
Medicago Medtr2g101180.3 343 92.0 97.1 | coatomer subunit delta-like protein | HC | chr2:43502531-43497041 | 20130731
Soybean Glyma20g24550.1 341 92.0 96.0  
LJGI gnl|LJGI|TC72025 803 94.3 94.3 similar to UniRef100_A7P2Q5 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2256170.2 length: 175 aa.
IPR008968 Clathrin adaptor, mu subunit, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF00928 Adap_comp_sub 1.1e-19 32-160
ProfileScan PS51072 MHD 32.954 1-175
superfamily SSF49447 Second 2.4e-10 2-156
IPR027059 Coatomer delta subunit
Biological Process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER    
Cellular Component GO:0030126 COPI vesicle coat    
HMMPanther PTHR10121 COATOMER 1.1e-78 1-175
no_ID  
HMMPanther PTHR10121:SF0 COATOMER 1.1e-78 1-175
Wolf-PSORT
Lj5g3v2256170.2	nucl 12.5, cyto_nucl 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2256170.2