Miyakogusa Predicted Gene
- Lj5g3v2242480.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LLX5_SOYBN |
109 |
38.3 |
55.1 |
(tr|K7LLX5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr5g044670.1 |
70.1 |
29.7 |
46.7 |
| B3 DNA-binding domain protein | LC | chr5:19602773-19604212 | 20130731 |
| Soybean |
Glyma20g24220.1 |
89.7 |
35.3 |
53.5 |
|
| LJGI |
gnl|LJGI|BP038008 |
898 |
98.3 |
98.3 |
similar to UniRef100_A4AC32 Cluster: Transferase; n=1; Congregibacter litoralis KT71|Rep: Transferase - Congregibacter litoralis KT71, partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2242480.1 |
length: 193 aa. |
| IPR003340 |
B3 DNA binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| ProfileScan |
PS50863 |
B3 |
9.192 |
1-82 |
| IPR015300 |
DNA-binding pseudobarrel domain |
| Gene3D |
G3DSA:2.40.330.10 |
no description |
1.5e-06 |
2-80 |
| superfamily |
SSF101936 |
DNA-binding |
2e-06 |
1-83 |
- Wolf-PSORT
Lj5g3v2242480.1 nucl 10, extr 2, chlo 1, plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2242480.1 |
|