Miyakogusa Predicted Gene

Lj5g3v1998980.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1NGX0_SOYBN 1429 68.1 74.4 (tr|I1NGX0) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT4G09980.1 812 55.5 65.0 | Symbols: EMB1691 | Methyltransferase MT-A70 family protein | chr4:6247978-6252030 REVERSE LENGTH=963

Medicago Medtr1g100210.4 1375 66.2 73.5 | methyltransferase-like protein | HC | chr1:45158381-45164929 | 20130731

Soybean Glyma20g30130.1 1366 65.6 71.4

LJGI gnl|LJGI|GO013193 1390 99.2 99.2 similar to UniRef100_A7QG40 Cluster: Chromosome undetermined scaffold_91, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_91, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1998980.1 length: 1109 aa.

IPR002052 DNA methylase, N-6 adenine-specific, conserved site

method AccNumber shortName E-value location

Molecular Function GO:0003676 nucleic acid binding

Molecular Function GO:0008168 methyltransferase activity

Biological Process GO:0032259 methylation

PatternScan PS00092 N6_MTASE NA 778-784

IPR007757 MT-A70-like

Biological Process GO:0006139 nucleobase-containing compound metabolic process

Molecular Function GO:0008168 methyltransferase activity

HMMPfam PF05063 MT-A70 2e-51 775-953

ProfileScan PS51143 MT_A70 45.032 734-973

no_ID

Gene3D G3DSA:3.40.50.150 no description 0.00033 924-925

HMMPanther PTHR13107 KARYOGAMY 3.4e-218 206-1067

HMMPanther PTHR13107:SF0 SUBFAMILY 3.4e-218 206-1067

ProfileScan PS51592 SAM_MTA70L_2 79.665 549-1089

Seg seg seg NA 30-68
122-143
188-206
559-576
582-594
617-632
652-666
1010-1017
1018-1029

superfamily SSF53335 S-adenosyl-L-methionine-dependent 3.9e-11 742-884

Wolf-PSORT

Lj5g3v1998980.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1998980.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1NGX0_SOYBN	1429	68.1	74.4	(tr\|I1NGX0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT4G09980.1	812	55.5	65.0	\| Symbols: EMB1691 \| Methyltransferase MT-A70 family protein \| chr4:6247978-6252030 REVERSE LENGTH=963
Medicago	Medtr1g100210.4	1375	66.2	73.5	\| methyltransferase-like protein \| HC \| chr1:45158381-45164929 \| 20130731
Soybean	Glyma20g30130.1	1366	65.6	71.4
LJGI	gnl\|LJGI\|GO013193	1390	99.2	99.2	similar to UniRef100_A7QG40 Cluster: Chromosome undetermined scaffold_91, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_91, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)

IPR002052	DNA methylase, N-6 adenine-specific, conserved site
Lj5g3v1998980.1				length: 1109 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003676	nucleic acid binding
Molecular Function	GO:0008168	methyltransferase activity
Biological Process	GO:0032259	methylation
PatternScan	PS00092	N6_MTASE	NA	778-784
IPR007757	MT-A70-like
Biological Process	GO:0006139	nucleobase-containing compound metabolic process
Molecular Function	GO:0008168	methyltransferase activity
HMMPfam	PF05063	MT-A70	2e-51	775-953
ProfileScan	PS51143	MT_A70	45.032	734-973
no_ID
Gene3D	G3DSA:3.40.50.150	no description	0.00033	924-925
HMMPanther	PTHR13107	KARYOGAMY	3.4e-218	206-1067
HMMPanther	PTHR13107:SF0	SUBFAMILY	3.4e-218	206-1067
ProfileScan	PS51592	SAM_MTA70L_2	79.665	549-1089
Seg	seg	seg	NA	30-68 122-143 188-206 559-576 582-594 617-632 652-666 1010-1017 1018-1029
superfamily	SSF53335	S-adenosyl-L-methionine-dependent	3.9e-11	742-884