Miyakogusa Predicted Gene
- Lj5g3v1699140.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JKH2_MEDTR |
694 |
71.8 |
82.8 |
(tr|G7JKH2) Integrator complex subunit-like protein OS=Medicago truncatula GN=MTR_4g132910 PE=4 SV=1 |
| TAIR_pep |
AT4G14590.1 |
512 |
56.2 |
72.6 |
| Symbols: emb2739 | embryo defective 2739 | chr4:8374391-8375962 FORWARD LENGTH=508 |
| Medicago |
Medtr4g132910.3 |
696 |
71.9 |
83.0 |
| integrator complex subunit 3 | HC | chr4:55604499-55608717 | 20130731 |
| Soybean |
Glyma20g33280.1 |
617 |
65.5 |
76.3 |
|
| LJGI |
gnl|LJGI|TC68731 |
878 |
99.8 |
99.8 |
weakly similar to UniRef100_A7PQZ1 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1699140.1 |
length: 473 aa. |
| IPR019333 |
Integrator complex subunit 3 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF10189 |
DUF2356 |
9.2e-88 |
233-458 |
| no_ID |
|
| HMMPanther |
PTHR13587 |
FAMILY |
9.2e-200 |
4-457 |
| HMMPanther |
PTHR13587:SF3 |
GB |
9.2e-200 |
4-457 |
| Seg |
seg |
seg |
NA |
123-128 |
- Wolf-PSORT
Lj5g3v1699140.1 cyto 10, nucl 1, plas 1, vacu 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1699140.1 |
|