Miyakogusa Predicted Gene

Lj5g3v1692550.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TA39_SOYBN 747 91.4 96.1 (tr|C6TA39) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT4G03020.2 647 79.2 90.4 | Symbols: | transducin family protein / WD-40 repeat family protein | chr4:1331704-1334472 REVERSE LENGTH=493
Medicago Medtr1g089290.2 729 90.4 94.6 | transducin/WD-like repeat-protein | HC | chr1:40076312-40081778 | 20130731
Soybean Glyma10g02800.1 747 91.4 96.1  
LJGI gnl|LJGI|TC78209 1774 99.3 99.3 similar to UniRef100_O24467 Cluster: LEC14B homolog; n=1; Prunus armeniaca|Rep: LEC14B homolog - Prunus armeniaca (Apricot), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1692550.3 length: 384 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 4.4e-09 182-214
223-260
348-383
HMMSmart SM00320 WD40 1.8e-07 32-68
77-113
119-171
175-214
221-260
297-342
345-384
ProfileScan PS50082 WD_REPEATS_2 11.879 139-180
181-214
228-269
352-384
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.2e-53 46-384
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 25.839 139-384
superfamily SSF50978 WD40 8.7e-55 40-384
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 3.4e-05 201-215
247-261
371-384
no_ID  
HMMPanther PTHR19847 WD40 5.4e-250 1-384
HMMPanther PTHR19847:SF3 WD-REPEAT 5.4e-250 1-384
Wolf-PSORT
Lj5g3v1692550.3	chlo 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1692550.3