Miyakogusa Predicted Gene

Lj5g3v1516760.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL C6T480_SOYBN 305 82.7 85.3 (tr|C6T480) Uncharacterized protein OS=Glycine max PE=2 SV=1

TAIR_pep AT1G56420.1 217 67.0 73.2 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:21122772-21124234 REVERSE LENGTH=183

Medicago Medtr1g084000.2 304 80.9 82.4 | hypothetical protein | HC | chr1:37437982-37442930 | 20130731

Soybean Glyma10g28860.1 305 82.7 85.3

LJGI gnl|LJGI|TC76286 799 100.0 100.0 similar to UniRef100_A7PRS4 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1516760.1 length: 195 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 135-152

Wolf-PSORT

Lj5g3v1516760.1 nucl 9.5, cyto_nucl 6, cysk 2, cyto 1.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1516760.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	C6T480_SOYBN	305	82.7	85.3	(tr\|C6T480) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep	AT1G56420.1	217	67.0	73.2	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). \| chr1:21122772-21124234 REVERSE LENGTH=183
Medicago	Medtr1g084000.2	304	80.9	82.4	\| hypothetical protein \| HC \| chr1:37437982-37442930 \| 20130731
Soybean	Glyma10g28860.1	305	82.7	85.3
LJGI	gnl\|LJGI\|TC76286	799	100.0	100.0	similar to UniRef100_A7PRS4 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)

no_ID
Lj5g3v1516760.1				length: 195 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	135-152