Miyakogusa Predicted Gene

Lj5g3v1355040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LG02_SOYBN 362 75.6 79.7 (tr|I1LG02) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G04500.1 293 79.9 91.7 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:1212065-1213795 REVERSE LENGTH=245
Medicago Medtr1g080150.1 349 73.8 79.6 | RNA recognition motif, a.k.a. RRM, RBD protein | HC | chr1:35593441-35588449 | 20130731
Soybean Glyma11g01300.1 362 75.6 79.7  
LJGI gnl|LJGI|TC58460 1378 99.9 99.9 similar to UniRef100_A7PVJ9 Cluster: Chromosome chr9 scaffold_33, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_33, whole genome shotgun sequence - Vitis vinifera (Grape), partial (74%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1355040.1 length: 231 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.5e-19 125-195
HMMSmart SM00360 RNA 2.7e-21 124-197
ProfileScan PS50102 RRM 16.261 123-201
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 4.4e-24 100-205
no_ID  
HMMPanther PTHR24012 FAMILY 2.8e-65 97-216
HMMPanther PTHR24012:SF41 SUBFAMILY 2.8e-65 97-216
Seg seg seg NA 36-62
superfamily SSF54928 RNA-binding 3.5e-23 106-223
Wolf-PSORT
Lj5g3v1355040.1	nucl 12, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1355040.1