Miyakogusa Predicted Gene

Lj5g3v1208000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S7Z4_LOTJA 380 100.0 100.0 (tr|I3S7Z4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G22950.2 345 88.5 96.2 | Symbols: ARFC1 | ADP-ribosylation factor C1 | chr3:8136364-8137513 REVERSE LENGTH=183
Medicago Medtr1g076550.1 355 93.4 98.3 | ADP-ribosylation factor-like protein A1D | HC | chr1:34132452-34137124 | 20130731
Soybean Glyma10g32200.2 365 95.1 98.9  
LJGI gnl|LJGI|TC78017 1076 99.6 99.6 homologue to UniRef100_A7NWX9 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1208000.1 length: 183 aa.
IPR003579 Small GTPase superfamily, Rab type
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 0.0094 18-151
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 1.3e-22 16-143
IPR006687 Small GTPase superfamily, SAR1-type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMSmart SM00178 Sar1p-like 2e-19 1-177
IPR006689 Small GTPase superfamily, ARF/SAR type
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00328 SAR1GTPBP 8.8e-19 19-42
47-71
74-99
119-140
HMMPfam PF00025 Arf 2.9e-66 14-176
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 8.4e-82 1-181
ProfileScan PS51417 ARF 22.547 11-177
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.7e-48 15-183
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.2e-56 2-177
HMMPanther PTHR11711 ADP 1.5e-114 1-177
HMMPanther PTHR11711:SF31 ADP-RIBOSYLATION 1.5e-114 1-177
Wolf-PSORT
Lj5g3v1208000.1	chlo 6, cyto 4, plas 2, cyto_pero 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1208000.1