Miyakogusa Predicted Gene

Lj5g3v0659910.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SBL1_LOTJA 249 90.7 90.7 (tr|I3SBL1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G37220.1 118 53.2 67.7 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:15634980-15636331 REVERSE LENGTH=289
Medicago Medtr1g064230.1 160 59.9 71.7 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr1:28254735-28256581 | 20130731
Soybean Glyma10g06620.1 176 66.2 72.2  
LJGI gnl|LJGI|TC70724 900 100.0 100.0 similar to UniRef100_Q08935 Cluster: 29 kDa ribonucleoprotein A, chloroplast precursor; n=2; Nicotiana|Rep: 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana sylvestris (Wood tobacco), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0659910.2 length: 152 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.2e-17 89-151
HMMSmart SM00360 RNA 3.6e-13 88-152
ProfileScan PS50102 RRM 16.023 87-152
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 3.9e-22 71-151
no_ID  
HMMPanther PTHR24012 FAMILY 5.9e-39 61-151
HMMPanther PTHR24012:SF160PUTATIVE UNCHARACTERIZED 5.9e-39 61-151
Seg seg seg NA 136-147
superfamily SSF54928 RNA-binding 1.3e-20 85-152
Wolf-PSORT
Lj5g3v0659910.2	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0659910.2 Not targeted -24.515 -0.008 -2.576 19.89% -21.931