Miyakogusa Predicted Gene

Lj5g3v0586520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q7XZT4_PEA 406 72.1 83.5 (tr|Q7XZT4) RPA 32kDa OS=Pisum sativum PE=2 SV=1
TAIR_pep AT2G24490.2 227 42.3 64.8 | Symbols: RPA2, ATRPA2, ROR1, ATRPA32A, RPA32A | replicon protein A2 | chr2:10398651-10400416 REVERSE LENGTH=279
Medicago Medtr1g009890.1 399 71.0 83.5 | replication protein A 32 kDa subunit-like protein | HC | chr1:1581516-1585760 | 20130731
Soybean Glyma17g29730.1 401 72.0 82.5  
LJGI gnl|LJGI|TC58053 1606 100.0 100.0 similar to UniRef100_Q7XZT4 Cluster: RPA 32kDa; n=1; Pisum sativum|Rep: RPA 32kDa - Pisum sativum (Garden pea), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0586520.1 length: 270 aa.
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 6.2e-10 68-140
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 1.1e-13 207-270
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 4.9e-46 33-162
superfamily SSF50249 Nucleic 3.8e-38 36-164
IPR014646 Replication protein A, subunit RPA32
HMMPIR PIRSF036949 Replication 2.2e-67 1-270
IPR014892 Replication protein A, C-terminal
HMMPfam PF08784 RPA_C 2e-16 165-267
no_ID  
HMMPanther PTHR13989 REPLICATION 2.4e-73 1-270
HMMPanther PTHR13989:SF7 SUBFAMILY 2.4e-73 1-270
Seg seg seg NA 9-19
superfamily SSF46785 "Winged 3.4e-12 206-270
Wolf-PSORT
Lj5g3v0586520.1	nucl 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0586520.1