Miyakogusa Predicted Gene

Lj5g3v0539700.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XQ24_PRUPE 207 95.2 98.1 (tr|M5XQ24) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006122mg PE=4 SV=1
TAIR_pep AT5G11170.2 192 86.5 94.2 | Symbols: | DEAD/DEAH box RNA helicase family protein | chr5:3554272-3556646 FORWARD LENGTH=344
Medicago Medtr1g012420.1 201 92.3 96.2 | DEAD-box ATP-dependent RNA helicase-like protein | HC | chr1:2463886-2455302 | 20130731
Soybean Glyma06g07280.2 204 94.2 96.2  
LJGI gnl|LJGI|FS325491 133 81.1 81.1 homologue to UniRef100_A7QIQ3 Cluster: Chromosome chr9 scaffold_104, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_104, whole genome shotgun sequence - Vitis vinifera (Grape), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0539700.2 length: 104 aa.
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 4e-21 2-101
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
ProfileScan PS51192 HELICASE_ATP_BIND_1 14.212 1-104
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.4e-24 1-104
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.5e-32 1-102
HMMPanther PTHR24031 FAMILY 4.2e-61 1-104
HMMPanther PTHR24031:SF75 SUBFAMILY 4.2e-61 1-104
Wolf-PSORT
Lj5g3v0539700.2	cyto 7, chlo 3, nucl 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0539700.2