Miyakogusa Predicted Gene

Lj5g3v0391470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S3T1_LOTJA 714 100.0 100.0 (tr|I3S3T1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G26040.2 567 80.2 88.0 | Symbols: HDA2 | histone deacetylase 2 | chr5:9099321-9101598 REVERSE LENGTH=387
Medicago Medtr1g016440.1 627 88.3 92.6 | histone deacetylase superfamily protein | HC | chr1:4371842-4377658 | 20130731
Soybean Glyma17g34770.1 643 89.6 93.4  
LJGI gnl|LJGI|TC74080 1907 97.8 97.8 similar to UniRef100_Q944K3 Cluster: Histone deacetylase 2; n=1; Arabidopsis thaliana|Rep: Histone deacetylase 2 - Arabidopsis thaliana (Mouse-ear cress), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0391470.1 length: 348 aa.
IPR000286 Histone deacetylase superfamily
method AccNumber shortName E-value location
FPrintScan PR01270 HDASUPER 1.1e-11 155-178
189-204
266-276
HMMPanther PTHR10625 HISTONE 2.4e-173 15-341
IPR023801 Histone deacetylase domain
Gene3D G3DSA:3.40.800.20 no description 1.6e-59 25-332
HMMPfam PF00850 Hist_deacetyl 1.3e-60 49-333
no_ID  
HMMPanther PTHR10625:SF9 HISTONE 2.4e-173 15-341
superfamily SSF52768 Arginase/deacetylase 3.4e-73 30-336
Wolf-PSORT
Lj5g3v0391470.1	nucl 8, chlo 3, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0391470.1