Miyakogusa Predicted Gene

Lj5g3v0279130.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M8G7_SOYBN 1686 77.5 85.9 (tr|K7M8G7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G20720.1 915 55.8 69.0 | Symbols: | RAD3-like DNA-binding helicase protein | chr1:7185658-7192794 REVERSE LENGTH=1175
Medicago Medtr1g026490.1 1680 75.6 83.7 | fanconi anemia group J-like protein | HC | chr1:8631572-8617169 | 20130731
Soybean Glyma14g39780.1 1124 67.5 74.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0279130.2 length: 1083 aa.
IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00690 DEAH_ATP_HELICASE NA 114-123
IPR006554 Helicase-like, DEXD box c2 type
Molecular Function GO:0004003 ATP-dependent DNA helicase activity    
Molecular Function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides    
HMMSmart SM00488 no description 0.0022 1-159
IPR006555 ATP-dependent helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006139 nucleobase-containing compound metabolic process    
Molecular Function GO:0008026 ATP-dependent helicase activity    
Molecular Function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides    
HMMPfam PF13307 Helicase_C_2 1.2e-58 380-589
HMMSmart SM00491 no description 9.5e-38 397-577
IPR010614 DEAD2
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0004003 ATP-dependent DNA helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF06733 DEAD_2 8.1e-32 2-139
IPR014013 Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type
Molecular Function GO:0016817 hydrolase activity, acting on acid anhydrides    
ProfileScan PS51193 HELICASE_ATP_BIND_2 13.587 1-191
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-09 82-574
no_ID  
HMMPanther PTHR11472 DNA 1.3e-248 1-689
HMMPanther PTHR11472:SF6 BRCA1 1.3e-248 1-689
Seg seg seg NA 768-782
Wolf-PSORT
Lj5g3v0279130.2	nucl 10, chlo 1, cyto 1, mito 1, cysk 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0279130.2