Miyakogusa Predicted Gene
- Lj5g3v0108280.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MXX4_SOYBN |
569 |
76.5 |
82.4 |
(tr|I1MXX4) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G19600.1 |
480 |
69.6 |
79.7 |
| Symbols: | pfkB-like carbohydrate kinase family protein | chr1:6779085-6780898 FORWARD LENGTH=355 |
| Medicago |
Medtr3g112040.1 |
536 |
76.2 |
85.8 |
| pfkB family carbohydrate kinase | HC | chr3:52420086-52425024 | 20130731 |
| Soybean |
Glyma14g07980.2 |
559 |
75.3 |
82.3 |
|
| LJGI |
gnl|LJGI|TC64304 |
2177 |
100.0 |
100.0 |
similar to UniRef100_A7NTA3 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0108280.1 |
length: 364 aa. |
| IPR011611 |
Carbohydrate kinase PfkB |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF00294 |
PfkB |
8.7e-43 |
70-340 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.1190.20 |
no description |
3.4e-59 |
25-352 |
| HMMPanther |
PTHR10584 |
SUGAR |
2.4e-137 |
17-361 |
| HMMPanther |
PTHR10584:SF26 |
PFKB-TYPE |
2.4e-137 |
17-361 |
| Seg |
seg |
seg |
NA |
90-105 |
| superfamily |
SSF53613 |
Ribokinase-like |
6.5e-53 |
19-346 |
- Wolf-PSORT
Lj5g3v0108280.1 chlo 6, nucl 2, plas 2, nucl_plas 2, cyto 1, mito 1, cysk 1, golg_plas 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0108280.1 |
|