Miyakogusa Predicted Gene

Lj5g3v0069830.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LCF5_MEDTR 700 66.5 76.3 (tr|G7LCF5) Poly(A) polymerase OS=Medicago truncatula GN=MTR_8g106560 PE=4 SV=1
TAIR_pep AT1G17980.1 414 47.6 57.9 | Symbols: PAPS1 | poly(A) polymerase 1 | chr1:6187742-6191418 REVERSE LENGTH=713
Medicago Medtr8g106560.2 730 71.8 82.1 | poly(A) polymerase-like protein | HC | chr8:44967321-44960896 | 20130731
Soybean Glyma09g31080.1 674 69.7 81.5  
LJGI gnl|LJGI|FS322881 973 100.0 100.0 similar to UniRef100_A7PGZ4 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0069830.1 length: 497 aa.
IPR007010 Poly(A) polymerase, RNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0043631 RNA polyadenylation    
Gene3D G3DSA:3.30.70.590 no description 1.1e-31 101-225
HMMPfam PF04926 PAP_RNA-bind 2.4e-34 100-232
IPR007012 Poly(A) polymerase, central domain
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Biological Process GO:0043631 RNA polyadenylation    
HMMPfam PF04928 PAP_central 1.9e-40 1-99
IPR011068 Nucleotidyltransferase, class I, C-terminal-like
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0016779 nucleotidyltransferase activity    
Biological Process GO:0031123 RNA 3'-end processing    
superfamily SSF55003 PAP/Archaeal 3.3e-42 99-225
no_ID  
Gene3D G3DSA:1.10.1410.10 no description 5.1e-39 2-99
HMMPanther PTHR10682 POLY(A) 6.5e-147 1-337
HMMPanther PTHR10682:SF5 POLY(A) 6.5e-147 1-337
Seg seg seg NA 455-468
superfamily SSF81631 PAP/OAS1 6.1e-36 1-98
Wolf-PSORT
Lj5g3v0069830.1	chlo 4, nucl 4, mito 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0069830.1