Miyakogusa Predicted Gene

Lj4g3v3114000.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LCF5_MEDTR 932 67.9 76.7 (tr|G7LCF5) Poly(A) polymerase OS=Medicago truncatula GN=MTR_8g106560 PE=4 SV=1
TAIR_pep AT1G17980.1 664 56.2 65.8 | Symbols: PAPS1 | poly(A) polymerase 1 | chr1:6187742-6191418 REVERSE LENGTH=713
Medicago Medtr8g106560.2 979 75.3 84.8 | poly(A) polymerase-like protein | HC | chr8:44967321-44960896 | 20130731
Soybean Glyma09g31080.1 919 73.3 84.3  
LJGI gnl|LJGI|FS322881 973 100.0 100.0 similar to UniRef100_A7PGZ4 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3114000.2 length: 628 aa.
IPR007010 Poly(A) polymerase, RNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0043631 RNA polyadenylation    
Gene3D G3DSA:3.30.70.590 no description 1.7e-31 232-356
HMMPfam PF04926 PAP_RNA-bind 3.7e-34 231-363
IPR007012 Poly(A) polymerase, central domain
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Biological Process GO:0043631 RNA polyadenylation    
HMMPfam PF04928 PAP_central 2.6e-91 40-230
IPR011068 Nucleotidyltransferase, class I, C-terminal-like
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0016779 nucleotidyltransferase activity    
Biological Process GO:0031123 RNA 3'-end processing    
superfamily SSF55003 PAP/Archaeal 3.3e-42 230-356
no_ID  
Gene3D G3DSA:1.10.1410.10 no description 1.8e-90 25-230
HMMPanther PTHR10682 POLY(A) 2.1e-257 1-468
HMMPanther PTHR10682:SF5 POLY(A) 2.1e-257 1-468
Seg seg seg NA 586-599
superfamily SSF81301 Nucleotidyltransferase 5.1e-23 1-95
superfamily SSF81631 PAP/OAS1 5.9e-68 80-229
Wolf-PSORT
Lj4g3v3114000.2	nucl 12, cyto 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3114000.2