Miyakogusa Predicted Gene
- Lj4g3v3014580.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SIE9_LOTJA |
345 |
91.8 |
92.3 |
(tr|I3SIE9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G23370.1 |
189 |
58.6 |
72.8 |
| Symbols: | GRAM domain-containing protein / ABA-responsive protein-related | chr5:7863542-7864201 REVERSE LENGTH=219 |
| Medicago |
Medtr8g100065.2 |
280 |
81.7 |
92.7 |
| GRAM domain protein/ABA-responsive-like protein | HC | chr8:42396373-42394577 | 20130731 |
| Soybean |
Glyma09g29380.1 |
259 |
78.0 |
86.8 |
|
| LJGI |
gnl|LJGI|TC77508 |
948 |
100.0 |
100.0 |
similar to UniRef100_A7QTZ2 Cluster: Chromosome undetermined scaffold_174, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_174, whole genome shotgun sequence - Vitis vinifera (Grape), partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3014580.1 |
length: 183 aa. |
| IPR004182 |
GRAM |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02893 |
GRAM |
1.6e-12 |
64-137 |
| HMMSmart |
SM00568 |
domain |
7.8e-13 |
62-140 |
| no_ID |
|
| HMMPanther |
PTHR31256 |
FAMILY |
2.2e-81 |
20-183 |
| Seg |
seg |
seg |
NA |
6-19 |
- Wolf-PSORT
Lj4g3v3014580.1 cyto 8, nucl 2, chlo 1, mito 1, extr 1, pero 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3014580.1 |
|