Miyakogusa Predicted Gene

Lj4g3v3003880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KRX4_SOYBN 812 71.9 82.7 (tr|K7KRX4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G23840.1 442 49.0 65.2 | Symbols: | Leucine-rich repeat (LRR) family protein | chr4:12400379-12403190 FORWARD LENGTH=597
Medicago Medtr8g099415.3 779 68.9 81.3 | F-box/LRR protein, putative | HC | chr8:41921398-41925558 | 20130731
Soybean Glyma05g36920.1 541 53.4 64.7  
LJGI gnl|LJGI|TC58266 1358 100.0 100.0 weakly similar to UniRef100_A7QUA7 Cluster: Chromosome chr2 scaffold_176, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_176, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3003880.1 length: 579 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 4.647 164-184
212-233
323-343
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 3e+02 88-113
114-138
162-186
321-345
476-501
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.6e-06 293-407
408-501
HMMPanther PTHR23125 F-BOX/LEUCINE 1.4e-122 45-512
HMMPanther PTHR23125:SF13 SUBFAMILY 1.4e-122 45-512
HMMPfam PF13516 LRR_6 1.2 114-131
139-160
323-343
Seg seg seg NA 44-59
525-537
superfamily SSF52047 RNI-like 1e-36 68-361
superfamily SSF52058 L 9e-19 292-513
Wolf-PSORT
Lj4g3v3003880.1	nucl 5, cyto 5, cyto_nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3003880.1