Miyakogusa Predicted Gene
- Lj4g3v3002500.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S1Y2_LOTJA |
429 |
90.0 |
90.0 |
(tr|I3S1Y2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G64200.1 |
312 |
67.1 |
74.6 |
| Symbols: VHA-E3 | vacuolar H+-ATPase subunit E isoform 3 | chr1:23828537-23830002 REVERSE LENGTH=237 |
| Medicago |
Medtr8g099190.1 |
344 |
72.9 |
80.4 |
| archaeal/vacuolar-type H+-ATPase subunit E | HC | chr8:41719984-41715699 | 20130731 |
| Soybean |
Glyma05g37190.1 |
350 |
74.6 |
80.0 |
|
| LJGI |
gnl|LJGI|TC57553 |
1433 |
100.0 |
100.0 |
similar to UniRef100_A7QNC1 Cluster: Chromosome chr2 scaffold_132, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_132, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v3002500.1 |
length: 240 aa. |
| IPR002842 |
ATPase, V1/A1 complex, subunit E |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0015991 |
ATP hydrolysis coupled proton transport |
|
|
| Cellular Component |
GO:0033178 |
proton-transporting two-sector ATPase complex, catalytic domain |
|
|
| Molecular Function |
GO:0046961 |
proton-transporting ATPase activity, rotational mechanism |
|
|
| HAMAP |
MF_00311 |
ATP_synth_E_arch |
9.128 |
8-236 |
| HMMPfam |
PF01991 |
vATP-synt_E |
1.5e-70 |
16-235 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
38-62 |
| HMMPanther |
PTHR11583 |
VACUOLAR |
6.9e-100 |
1-237 |
| Seg |
seg |
seg |
NA |
47-70 |
- Wolf-PSORT
Lj4g3v3002500.1 cyto 9, chlo 1, nucl 1, extr 1, E.R. 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v3002500.1 |
Not targeted |
-48.635 |
-2.165 |
-6.817 |
71.90% |
-39.654
|