Miyakogusa Predicted Gene

Lj4g3v2858500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KP02_SOYBN 627 64.7 69.4 (tr|I1KP02) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G72160.1 451 62.7 78.5 | Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:27153823-27155609 REVERSE LENGTH=490
Medicago Medtr8g095360.1 610 62.5 69.3 | patellin-3 protein | HC | chr8:39892589-39895703 | 20130731
Soybean Glyma06g16790.1 603 65.1 70.3  
LJGI gnl|LJGI|TC69409 1306 100.0 100.0 similar to UniRef100_A7PKK5 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2858500.1 length: 590 aa.
IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006810 transport    
FPrintScan PR00180 CRETINALDHBP 9.2e-05 268-290
431-450
IPR001251 CRAL-TRIO domain
Gene3D G3DSA:3.40.525.10 no description 3.3e-63 263-521
HMMPfam PF00650 CRAL_TRIO 7.3e-30 313-473
HMMSmart SM00516 Domain 1.7e-37 309-476
ProfileScan PS50191 CRAL_TRIO 18.713 304-479
superfamily SSF52087 CRAL/TRIO 2.2e-37 303-476
IPR009038 GOLD
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
ProfileScan PS50866 GOLD 11.606 483-584
superfamily SSF101576 Supernatant 2.7e-06 482-585
IPR011074 CRAL/TRIO, N-terminal domain
HMMPfam PF03765 CRAL_TRIO_N 2.1e-08 262-290
HMMSmart SM01100 CRAL/TRIO, 7.6e-08 265-290
superfamily SSF46938 CRAL/TRIO 1.8e-17 6-307
no_ID  
Coil coil coiled-coil NA 89-110
HMMPanther PTHR23324 SEC14 1.1e-162 111-585
HMMPanther PTHR23324:SF4 SEC14 1.1e-162 111-585
Seg seg seg NA 2-13
20-44
57-70
155-193
211-222
229-242
300-313
574-586
Wolf-PSORT
Lj4g3v2858500.1	nucl 4, cyto 4, cyto_nucl 4, chlo 3, cysk_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2858500.1