Miyakogusa Predicted Gene
- Lj4g3v2846170.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SQ90_LOTJA |
177 |
89.7 |
89.7 |
(tr|I3SQ90) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT5G53590.1 |
58.5 |
38.4 |
63.0 |
| Symbols: | SAUR-like auxin-responsive protein family | chr5:21772107-21772535 FORWARD LENGTH=142 |
| Medicago |
Medtr8g094980.1 |
121 |
60.7 |
68.2 |
| SAUR-like auxin-responsive family protein | HC | chr8:39682644-39682040 | 20130731 |
| Soybean |
Glyma04g38410.1 |
134 |
67.3 |
77.2 |
|
| LJGI |
gnl|LJGI|TC73534 |
583 |
100.0 |
100.0 |
similar to UniRef100_A7PKQ1 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2846170.1 |
length: 97 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
1.9e-18 |
3-73 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
76-85 |
- Wolf-PSORT
Lj4g3v2846170.1 nucl 4, extr 3, cyto_nucl 3, chlo 2, cyto 2, mito 2, chlo_mito 2, cysk_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2846170.1 |
|