Miyakogusa Predicted Gene

Lj4g3v2689680.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SMD8_LOTJA 837 89.8 89.8 (tr|I3SMD8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G31810.1 646 77.7 89.8 | Symbols: | ACT domain-containing small subunit of acetolactate synthase protein | chr2:13524271-13528246 FORWARD LENGTH=491

Medicago Medtr8g088600.1 736 79.0 83.3 | acetolactate synthase, small subunit | HC | chr8:36766913-36775561 | 20130731

Soybean Glyma08g13290.1 725 77.8 83.7

LJGI gnl|LJGI|TC73520 1475 100.0 100.0 similar to UniRef100_A7R1G2 Cluster: Chromosome undetermined scaffold_351, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_351, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v2689680.2 length: 470 aa.

IPR004789 Acetolactate synthase, small subunit

method AccNumber shortName E-value location

Molecular Function GO:0003984 acetolactate synthase activity

Biological Process GO:0009082 branched-chain amino acid biosynthetic process

HMMTigr TIGR00119 acolac_sm: 8.2e-49 75-228
308-463

IPR019455 Acetolactate synthase, small subunit, C-terminal

HMMPfam PF10369 ALS_ss_C 1.4e-25 154-228
389-463

no_ID

BlastProDom PD002844 Q9SMC2_NICPL_Q9SMC2; 4e-29 305-382
77-147

Gene3D G3DSA:3.30.70.1150 no description 1.7e-26 154-230
389-467

Gene3D G3DSA:3.30.70.260 no description 4.5e-30 74-149
307-384

HMMPanther PTHR30239 ACETOLACTATE 2.9e-176 13-470

HMMPanther PTHR30239:SF0 ACETOLACTATE 2.9e-176 13-470

HMMPfam PF13710 ACT_5 1.6e-13 85-144
318-379

Seg seg seg NA 18-29
46-58
60-76

superfamily SSF55021 ACT-like 8.4e-18 149-234
384-468
70-153
307-383

Wolf-PSORT

Lj4g3v2689680.2 chlo 9, mito 5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v2689680.2 Targeted 1.968 -0.511 -2.085 0.40% 4.565

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SMD8_LOTJA	837	89.8	89.8	(tr\|I3SMD8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G31810.1	646	77.7	89.8	\| Symbols: \| ACT domain-containing small subunit of acetolactate synthase protein \| chr2:13524271-13528246 FORWARD LENGTH=491
Medicago	Medtr8g088600.1	736	79.0	83.3	\| acetolactate synthase, small subunit \| HC \| chr8:36766913-36775561 \| 20130731
Soybean	Glyma08g13290.1	725	77.8	83.7
LJGI	gnl\|LJGI\|TC73520	1475	100.0	100.0	similar to UniRef100_A7R1G2 Cluster: Chromosome undetermined scaffold_351, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_351, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)

IPR004789	Acetolactate synthase, small subunit
Lj4g3v2689680.2				length: 470 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003984	acetolactate synthase activity
Biological Process	GO:0009082	branched-chain amino acid biosynthetic process
HMMTigr	TIGR00119	acolac_sm:	8.2e-49	75-228 308-463
IPR019455	Acetolactate synthase, small subunit, C-terminal
HMMPfam	PF10369	ALS_ss_C	1.4e-25	154-228 389-463
no_ID
BlastProDom	PD002844	Q9SMC2_NICPL_Q9SMC2;	4e-29	305-382 77-147
Gene3D	G3DSA:3.30.70.1150	no description	1.7e-26	154-230 389-467
Gene3D	G3DSA:3.30.70.260	no description	4.5e-30	74-149 307-384
HMMPanther	PTHR30239	ACETOLACTATE	2.9e-176	13-470
HMMPanther	PTHR30239:SF0	ACETOLACTATE	2.9e-176	13-470
HMMPfam	PF13710	ACT_5	1.6e-13	85-144 318-379
Seg	seg	seg	NA	18-29 46-58 60-76
superfamily	SSF55021	ACT-like	8.4e-18	149-234 384-468 70-153 307-383