Miyakogusa Predicted Gene

Lj4g3v2618650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L7Z2_MEDTR 310 78.4 90.3 (tr|G7L7Z2) Cyclic phosphodiesterase OS=Medicago truncatula GN=MTR_8g087820 PE=2 SV=1
TAIR_pep AT4G18930.1 229 59.4 73.3 | Symbols: | RNA ligase/cyclic nucleotide phosphodiesterase family protein | chr4:10370797-10371885 FORWARD LENGTH=181
Medicago Medtr8g087820.1 310 78.4 90.3 | cyclic phosphodiesterase-like protein | HC | chr8:36333350-36335200 | 20130731
Soybean Glyma05g29580.1 287 75.3 85.4  
LJGI gnl|LJGI|TC67234 1116 99.8 99.8 similar to UniRef100_A7QDC8 Cluster: Chromosome chr10 scaffold_81, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_81, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2618650.1 length: 187 aa.
IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0016070 RNA metabolic process    
Gene3D G3DSA:3.90.1140.10 no description 3.4e-63 8-185
superfamily SSF55144 LigT-like 1.4e-42 6-184
IPR012386 2',3'-cyclic-nucleotide 3'-phosphodiesterase
Molecular Function GO:0004112 cyclic-nucleotide phosphodiesterase activity    
HMMPIR PIRSF017903 2',3' 1.2e-88 1-186
HMMPfam PF07823 CPDase 6.4e-40 14-184
Wolf-PSORT
Lj4g3v2618650.1	cyto 8, chlo 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2618650.1