Miyakogusa Predicted Gene
- Lj4g3v2603730.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LHV2_MEDTR |
339 |
97.6 |
99.4 |
(tr|G7LHV2) Actin-related protein 2/3 complex subunit OS=Medicago truncatula GN=MTR_8g085290 PE=4 SV=1 |
| TAIR_pep |
AT4G14147.1 |
323 |
93.5 |
98.2 |
| Symbols: ARPC4 | protein binding | chr4:8154079-8156246 REVERSE LENGTH=169 |
| Medicago |
Medtr8g085290.1 |
339 |
97.6 |
99.4 |
| actin-related protein 2/3 complex subunit 4 | HC | chr8:35327856-35324244 | 20130731 |
| Soybean |
Glyma08g11740.1 |
336 |
98.2 |
99.4 |
|
| LJGI |
gnl|LJGI|TC80156 |
609 |
98.5 |
98.5 |
homologue to UniRef100_Q6X0P2 Cluster: ARPC p20; n=1; Glycine max|Rep: ARPC p20 - Glycine max (Soybean), partial (86%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2603730.1 |
length: 170 aa. |
| IPR008384 |
ARP2/3 complex, 20kDa subunit (P20-Arc) |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005856 |
cytoskeleton |
|
|
| Cellular Component |
GO:0005885 |
Arp2/3 protein complex |
|
|
| Biological Process |
GO:0030041 |
actin filament polymerization |
|
|
| Biological Process |
GO:0034314 |
Arp2/3 complex-mediated actin nucleation |
|
|
| HMMPanther |
PTHR22629 |
ARP2/3 |
7.9e-113 |
3-170 |
| HMMPfam |
PF05856 |
ARPC4 |
6.4e-76 |
3-169 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.1460.20 |
no description |
4.7e-80 |
3-169 |
| superfamily |
SSF69645 |
Arp2/3 |
2.3e-75 |
3-169 |
- Wolf-PSORT
Lj4g3v2603730.1 cyto_nucl 6, nucl 5, chlo 4, cyto 3, chlo_mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2603730.1 |
|