Miyakogusa Predicted Gene

Lj4g3v2489550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KG11_MEDTR 867 83.3 91.5 (tr|G7KG11) DEAD-box ATP-dependent RNA helicase OS=Medicago truncatula GN=MTR_5g077690 PE=4 SV=1
TAIR_pep AT4G15850.1 670 64.6 77.5 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:9001426-9004534 FORWARD LENGTH=522
Medicago Medtr5g077690.1 867 83.3 91.5 | DEAD-box ATP-dependent RNA helicase | HC | chr5:33157541-33150855 | 20130731
Soybean Glyma14g14170.1 507 65.0 76.5  
LJGI gnl|LJGI|TC62972 1493 100.0 100.0 similar to UniRef100_A7Q174 Cluster: Chromosome chr10 scaffold_43, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_43, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2489550.1 length: 512 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 2.2e-19 358-431
HMMSmart SM00490 helicase 2.3e-19 347-431
ProfileScan PS51194 HELICASE_CTER 18.805 323-473
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 5e-33 53-283
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.3e-31 47-311
ProfileScan PS51192 HELICASE_ATP_BIND_1 20.305 63-295
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.4e-55 100-454
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.2e-39 267-298
304-458
HMMPanther PTHR24031 FAMILY 1.5e-167 14-497
HMMPanther PTHR24031:SF68 SUBFAMILY 1.5e-167 14-497
Wolf-PSORT
Lj4g3v2489550.1	nucl 8, cyto 4, cysk_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2489550.1