Miyakogusa Predicted Gene

Lj4g3v2295970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LCN4_SOYBN 803 80.2 85.8 (tr|K7LCN4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G29400.2 496 57.9 70.5 | Symbols: AML5, ML5 | MEI2-like protein 5 | chr1:10290393-10293696 REVERSE LENGTH=800
Medicago Medtr2g049640.2 752 76.6 83.6 | RNA recognition motif 2 in plant MEI2-like protein | HC | chr2:21883965-21877390 | 20130731
Soybean Glyma15g23420.1 739 83.7 89.1  
LJGI gnl|LJGI|TC81572 1552 100.0 100.0 similar to UniRef100_Q6J738 Cluster: AML5 (RNA-binding region RNP-1 (RNA recognition motif); RNA recognition motif 2); n=1; Medicago truncatula|Rep: AML5 (RNA-binding region RNP-1 (RNA recognition motif); RNA recognition motif 2) - Medicago truncatula (Barrel medic), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2295970.1 length: 483 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.1e-12 196-260
281-346
HMMSmart SM00360 RNA 3.2e-14 195-263
280-348
ProfileScan PS50102 RRM 14.658 194-267
279-352
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2.3e-17 192-277
280-362
no_ID  
HMMPanther PTHR24011 FAMILY 1.6e-157 32-415
HMMPanther PTHR24011:SF98 SUBFAMILY 1.6e-157 32-415
Seg seg seg NA 37-51
superfamily SSF54928 RNA-binding 1.5e-31 192-359
Wolf-PSORT
Lj4g3v2295970.1	nucl 9, chlo 2, cyto 1, plas 1, cysk 1, chlo_mito 1, cysk_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2295970.1