| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7MBH0_SOYBN | 536 | 65.9 | 82.7 | (tr|K7MBH0) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT2G43870.1 | 298 | 42.5 | 60.9 | | Symbols: | Pectin lyase-like superfamily protein | chr2:18166615-18168264 REVERSE LENGTH=384 |
| Medicago | Medtr2g435640.1 | 522 | 64.9 | 81.8 | | polygalacturonase | HC | chr2:13796366-13791435 | 20130731 |
| Soybean | Glyma07g37440.1 | 537 | 67.2 | 85.0 | |
| LJGI | gnl|LJGI|TC69749 | 1332 | 98.4 | 98.4 | weakly similar to UniRef100_A8VPP7 Cluster: Pollen-specific polygalacturonase; n=1; Brassica rapa subsp. campestris|Rep: Pollen-specific polygalacturonase - Brassica rapa subsp. campestris, partial (30%) |
| Lj4g3v2290300.1 | length: 368 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 4.2e-100 | 25-354 |
| PatternScan | PS00502 | POLYGALACTURONASE | NA | 210-223 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 3.7e+03 | 153-179 180-201 233-254 263-284 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 1.6e-112 | 2-367 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 1.3e-116 | 2-367 |
| no_ID | ||||
| HMMPanther | PTHR31375 | FAMILY | 1.5e-157 | 1-367 |
| HMMPanther | PTHR31375:SF0 | SUBFAMILY | 1.5e-157 | 1-367 |
Lj4g3v2290300.1 nucl 4, cysk 4, cysk_nucl 4, chlo 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj4g3v2290300.1 |