Miyakogusa Predicted Gene
- Lj4g3v2215080.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L3J2_SOYBN |
152 |
49.7 |
65.4 |
(tr|K7L3J2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G16920.1 |
125 |
41.0 |
55.3 |
| Symbols: UBC23, PFU2 | ubiquitin-conjugating enzyme 23 | chr2:7334559-7338827 REVERSE LENGTH=1102 |
| Medicago |
Medtr7g451770.1 |
145 |
46.6 |
61.5 |
| ubiquitin-conjugating enzyme | LC | chr7:17639614-17640606 | 20130731 |
| Soybean |
Glyma07g36760.1 |
152 |
49.7 |
65.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v2215080.1 |
length: 151 aa. |
| IPR000608 |
Ubiquitin-conjugating enzyme, E2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016881 |
acid-amino acid ligase activity |
|
|
| HMMPfam |
PF00179 |
UQ_con |
1.5e-17 |
2-100 |
| ProfileScan |
PS50127 |
UBIQUITIN_CONJUGAT_2 |
15.206 |
1-72 |
| IPR016135 |
Ubiquitin-conjugating enzyme/RWD-like |
| Gene3D |
G3DSA:3.10.110.10 |
no description |
2.1e-27 |
2-148 |
| superfamily |
SSF54495 |
UBC-like |
1.1e-18 |
1-95 |
| no_ID |
|
| HMMPanther |
PTHR24067 |
UBIQUITIN-CONJUGATING |
3.4e-34 |
1-100 |
| HMMPanther |
PTHR24067:SF22 |
UBIQUITIN |
3.4e-34 |
1-100 |
- Wolf-PSORT
Lj4g3v2215080.1 cyto 7.5, cyto_E.R. 4.5, nucl 2, chlo 1, mito 1, plas 1, extr 1, chlo_mito 1, cysk_nucl 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v2215080.1 |
|