Miyakogusa Predicted Gene

Lj4g3v2214790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S984_LOTJA 480 100.0 100.0 (tr|I3S984) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G20720.3 354 75.1 86.7 | Symbols: CPN20 | chaperonin 20 | chr5:7015015-7016354 FORWARD LENGTH=253
Medicago Medtr4g124910.1 385 80.8 89.6 | GroES chaperonin | HC | chr4:51805326-51802639 | 20130731
Soybean Glyma13g17260.2 390 82.1 88.8  
LJGI gnl|LJGI|TC63570 1427 100.0 100.0 similar to UniRef100_A7PDS7 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (84%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2214790.1 length: 240 aa.
IPR011032 GroES-like
method AccNumber shortName E-value location
superfamily SSF50129 GroES-like 6e-22 59-155
157-237
IPR017416 Chaperonin 21, chloroplast
HMMPIR PIRSF038157 Chaperonin 2.7e-142 1-239
IPR018369 Chaperonin Cpn10, conserved site
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
PatternScan PS00681 CHAPERONINS_CPN10 NA 63-87
161-185
IPR020818 Chaperonin Cpn10
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006457 protein folding    
FPrintScan PR00297 CHAPERONIN10 4.2e-26 63-78
85-106
119-131
140-153
Gene3D G3DSA:2.30.33.40 no description 3.3e-26 62-154
160-238
HAMAP MF_00580 CH10 23.361 62-154
HMMPanther PTHR10772 10 4.9e-108 47-217
HMMPfam PF00166 Cpn10 3.9e-22 63-152
161-236
HMMSmart SM00883 Chaperonin 1.1e-24 62-153
160-240
no_ID  
HMMPanther PTHR10772:SF0 10 4.9e-108 47-217
Wolf-PSORT
Lj4g3v2214790.1	chlo 10, mito 2, cyto 1, cyto_mito 1, E.R._vacu 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2214790.1 Not targeted -45.651 0 -12.327 65.93% -33.324