Miyakogusa Predicted Gene

Lj4g3v1389290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K072_SOYBN 1203 84.2 89.0 (tr|I1K072) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G63190.2 994 70.3 80.8 | Symbols: | MA3 domain-containing protein | chr5:25346145-25348563 FORWARD LENGTH=702
Medicago Medtr4g104360.1 1192 83.2 88.8 | topoisomerase-like protein | HC | chr4:43106223-43101677 | 20130731
Soybean Glyma05g02910.1 1203 84.2 89.0  
LJGI gnl|LJGI|TC79150 3126 99.9 99.9 similar to UniRef100_A7PCL2 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (73%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1389290.1 length: 703 aa.
IPR003891 Initiation factor eIF-4 gamma, MA3
method AccNumber shortName E-value location
HMMPfam PF02847 MA3 2e-32 123-234
287-398
422-531
585-692
HMMSmart SM00544 Domain 4.6e-35 123-234
287-398
421-532
584-693
ProfileScan PS51366 MI 23.956 122-243
286-407
420-541
583-702
IPR016021 MIF4-like, type 1/2/3
Biological Process GO:0016070 RNA metabolic process    
Gene3D G3DSA:1.25.40.180 no description 5.5e-61 121-279
281-404
419-628
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 6e-35 115-278
413-575
282-408
579-703
no_ID  
HMMPanther PTHR12626 PROGRAMMED 7.1e-254 59-702
HMMPanther PTHR12626:SF0 SUBFAMILY 7.1e-254 59-702
Seg seg seg NA 26-38
206-225
337-353
Wolf-PSORT
Lj4g3v1389290.1	nucl 4, chlo 3, plas 3, cyto 1, mito 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1389290.1